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Genetic heterogeneity and prognostic impact of recurrent ANK2 and TP53 mutations in mantle cell lymphoma: a multi-centre cohort study
The molecular features of mantle cell lymphoma (MCL), including its increased incidence, and complex therapies have not been investigated in detail, particularly in East Asian populations. In this study, we performed targeted panel sequencing (TPS) and whole-exome sequencing (WES) to investigate the...
Autores principales: | , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7414214/ https://www.ncbi.nlm.nih.gov/pubmed/32770099 http://dx.doi.org/10.1038/s41598-020-70310-9 |
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author | Jeong, Seri Park, Yu Jin Yun, Woobin Lee, Seung-Tae Choi, Jong Rak Suh, Cheolwon Jo, Jae-Cheol Cha, Hee Jeong Jeong, Jee-Yeong Chang, HeeKyung Cha, Yoon Jin Kim, Hyerim Park, Min-Jeong Song, Wonkeun Cho, Eun-Hae Jeong, Eun-Goo Lee, Junnam Park, Yongmin Lee, Yong Seok Kim, Da Jung Lee, Ho Sup |
author_facet | Jeong, Seri Park, Yu Jin Yun, Woobin Lee, Seung-Tae Choi, Jong Rak Suh, Cheolwon Jo, Jae-Cheol Cha, Hee Jeong Jeong, Jee-Yeong Chang, HeeKyung Cha, Yoon Jin Kim, Hyerim Park, Min-Jeong Song, Wonkeun Cho, Eun-Hae Jeong, Eun-Goo Lee, Junnam Park, Yongmin Lee, Yong Seok Kim, Da Jung Lee, Ho Sup |
author_sort | Jeong, Seri |
collection | PubMed |
description | The molecular features of mantle cell lymphoma (MCL), including its increased incidence, and complex therapies have not been investigated in detail, particularly in East Asian populations. In this study, we performed targeted panel sequencing (TPS) and whole-exome sequencing (WES) to investigate the genetic alterations in Korean MCL patients. We obtained a total of 53 samples from MCL patients from five Korean university hospitals between 2009 and 2016. We identified the recurrently mutated genes such as SYNE1, ATM, KMT2D, CARD11, ANK2, KMT2C, and TP53, which included some known drivers of MCL. The mutational profiles of our cohort indicated genetic heterogeneity. The significantly enriched pathways were mainly involved in gene expression, cell cycle, and programmed cell death. Multivariate analysis revealed that ANK2 mutations impacted the unfavourable overall survival (hazard ratio [HR] 3.126; P = 0.032). Furthermore, TP53 mutations were related to worse progression-free survival (HR 7.813; P = 0.043). Among the recurrently mutated genes with more than 15.0% frequency, discrepancies were found in only 5 genes from 4 patients, suggesting comparability of the TPS to WES in practical laboratory settings. We provide the unbiased genetic landscape that might contribute to MCL pathogenesis and recurrent genes conferring unfavourable outcomes. |
format | Online Article Text |
id | pubmed-7414214 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-74142142020-08-11 Genetic heterogeneity and prognostic impact of recurrent ANK2 and TP53 mutations in mantle cell lymphoma: a multi-centre cohort study Jeong, Seri Park, Yu Jin Yun, Woobin Lee, Seung-Tae Choi, Jong Rak Suh, Cheolwon Jo, Jae-Cheol Cha, Hee Jeong Jeong, Jee-Yeong Chang, HeeKyung Cha, Yoon Jin Kim, Hyerim Park, Min-Jeong Song, Wonkeun Cho, Eun-Hae Jeong, Eun-Goo Lee, Junnam Park, Yongmin Lee, Yong Seok Kim, Da Jung Lee, Ho Sup Sci Rep Article The molecular features of mantle cell lymphoma (MCL), including its increased incidence, and complex therapies have not been investigated in detail, particularly in East Asian populations. In this study, we performed targeted panel sequencing (TPS) and whole-exome sequencing (WES) to investigate the genetic alterations in Korean MCL patients. We obtained a total of 53 samples from MCL patients from five Korean university hospitals between 2009 and 2016. We identified the recurrently mutated genes such as SYNE1, ATM, KMT2D, CARD11, ANK2, KMT2C, and TP53, which included some known drivers of MCL. The mutational profiles of our cohort indicated genetic heterogeneity. The significantly enriched pathways were mainly involved in gene expression, cell cycle, and programmed cell death. Multivariate analysis revealed that ANK2 mutations impacted the unfavourable overall survival (hazard ratio [HR] 3.126; P = 0.032). Furthermore, TP53 mutations were related to worse progression-free survival (HR 7.813; P = 0.043). Among the recurrently mutated genes with more than 15.0% frequency, discrepancies were found in only 5 genes from 4 patients, suggesting comparability of the TPS to WES in practical laboratory settings. We provide the unbiased genetic landscape that might contribute to MCL pathogenesis and recurrent genes conferring unfavourable outcomes. Nature Publishing Group UK 2020-08-07 /pmc/articles/PMC7414214/ /pubmed/32770099 http://dx.doi.org/10.1038/s41598-020-70310-9 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Jeong, Seri Park, Yu Jin Yun, Woobin Lee, Seung-Tae Choi, Jong Rak Suh, Cheolwon Jo, Jae-Cheol Cha, Hee Jeong Jeong, Jee-Yeong Chang, HeeKyung Cha, Yoon Jin Kim, Hyerim Park, Min-Jeong Song, Wonkeun Cho, Eun-Hae Jeong, Eun-Goo Lee, Junnam Park, Yongmin Lee, Yong Seok Kim, Da Jung Lee, Ho Sup Genetic heterogeneity and prognostic impact of recurrent ANK2 and TP53 mutations in mantle cell lymphoma: a multi-centre cohort study |
title | Genetic heterogeneity and prognostic impact of recurrent ANK2 and TP53 mutations in mantle cell lymphoma: a multi-centre cohort study |
title_full | Genetic heterogeneity and prognostic impact of recurrent ANK2 and TP53 mutations in mantle cell lymphoma: a multi-centre cohort study |
title_fullStr | Genetic heterogeneity and prognostic impact of recurrent ANK2 and TP53 mutations in mantle cell lymphoma: a multi-centre cohort study |
title_full_unstemmed | Genetic heterogeneity and prognostic impact of recurrent ANK2 and TP53 mutations in mantle cell lymphoma: a multi-centre cohort study |
title_short | Genetic heterogeneity and prognostic impact of recurrent ANK2 and TP53 mutations in mantle cell lymphoma: a multi-centre cohort study |
title_sort | genetic heterogeneity and prognostic impact of recurrent ank2 and tp53 mutations in mantle cell lymphoma: a multi-centre cohort study |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7414214/ https://www.ncbi.nlm.nih.gov/pubmed/32770099 http://dx.doi.org/10.1038/s41598-020-70310-9 |
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