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The brain-derived neurotrophic factor Val66Met polymorphism increases segregation of structural correlation networks in healthy adult brains

BACKGROUND: Although structural correlation network (SCN) analysis is an approach to evaluate brain networks, the neurobiological interpretation of SCNs is still problematic. Brain-derived neurotrophic factor (BDNF) is well-established as a representative protein related to neuronal differentiation,...

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Autores principales: Ueda, Issei, Takemoto, Kazuhiro, Watanabe, Keita, Sugimoto, Koichiro, Ikenouchi, Atsuko, Kakeda, Shingo, Katsuki, Asuka, Yoshimura, Reiji, Korogi, Yukunori
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2020
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Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7414771/
https://www.ncbi.nlm.nih.gov/pubmed/32844059
http://dx.doi.org/10.7717/peerj.9632
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author Ueda, Issei
Takemoto, Kazuhiro
Watanabe, Keita
Sugimoto, Koichiro
Ikenouchi, Atsuko
Kakeda, Shingo
Katsuki, Asuka
Yoshimura, Reiji
Korogi, Yukunori
author_facet Ueda, Issei
Takemoto, Kazuhiro
Watanabe, Keita
Sugimoto, Koichiro
Ikenouchi, Atsuko
Kakeda, Shingo
Katsuki, Asuka
Yoshimura, Reiji
Korogi, Yukunori
author_sort Ueda, Issei
collection PubMed
description BACKGROUND: Although structural correlation network (SCN) analysis is an approach to evaluate brain networks, the neurobiological interpretation of SCNs is still problematic. Brain-derived neurotrophic factor (BDNF) is well-established as a representative protein related to neuronal differentiation, maturation, and survival. Since a valine-to-methionine substitution at codon 66 of the BDNF gene (BDNF Val66Met single nucleotide polymorphism (SNP)) is well-known to have effects on brain structure and function, we hypothesized that SCNs are affected by the BDNF Val66Met SNP. To gain insight into SCN analysis, we investigated potential differences between BDNF valine (Val) homozygotes and methionine (Met) carriers in the organization of their SCNs derived from inter-regional cortical thickness correlations. METHODS: Forty-nine healthy adult subjects (mean age = 41.1 years old) were divided into two groups according to their genotype (n: Val homozygotes = 16, Met carriers = 33). We obtained regional cortical thickness from their brain T1 weighted images. Based on the inter-regional cortical thickness correlations, we generated SCNs and used graph theoretical measures to assess differences between the two groups in terms of network integration, segregation, and modularity. RESULTS: The average local efficiency, a measure of network segregation, of BDNF Met carriers’ network was significantly higher than that of the Val homozygotes’ (permutation p-value = 0.002). Average shortest path lengths (a measure of integration), average local clustering coefficient (another measure of network segregation), small-worldness (a balance between integration and segregation), and modularity (a representative measure for modular architecture) were not significantly different between group (permutation p-values ≧ 0.01). DISCUSSION AND CONCLUSION: Our results suggest that the BDNF Val66Met polymorphism may potentially influence the pattern of brain regional morphometric (cortical thickness) correlations. Comparing networks derived from inter-regional cortical thickness correlations, Met carrier SCNs have denser connections with neighbors and are more distant from random networks than Val homozygote networks. Thus, it may be necessary to consider potential effects of BDNF gene mutations in SCN analyses. This is the first study to demonstrate a difference between Val homozygotes and Met carriers in brain SCNs.
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spelling pubmed-74147712020-08-24 The brain-derived neurotrophic factor Val66Met polymorphism increases segregation of structural correlation networks in healthy adult brains Ueda, Issei Takemoto, Kazuhiro Watanabe, Keita Sugimoto, Koichiro Ikenouchi, Atsuko Kakeda, Shingo Katsuki, Asuka Yoshimura, Reiji Korogi, Yukunori PeerJ Bioinformatics BACKGROUND: Although structural correlation network (SCN) analysis is an approach to evaluate brain networks, the neurobiological interpretation of SCNs is still problematic. Brain-derived neurotrophic factor (BDNF) is well-established as a representative protein related to neuronal differentiation, maturation, and survival. Since a valine-to-methionine substitution at codon 66 of the BDNF gene (BDNF Val66Met single nucleotide polymorphism (SNP)) is well-known to have effects on brain structure and function, we hypothesized that SCNs are affected by the BDNF Val66Met SNP. To gain insight into SCN analysis, we investigated potential differences between BDNF valine (Val) homozygotes and methionine (Met) carriers in the organization of their SCNs derived from inter-regional cortical thickness correlations. METHODS: Forty-nine healthy adult subjects (mean age = 41.1 years old) were divided into two groups according to their genotype (n: Val homozygotes = 16, Met carriers = 33). We obtained regional cortical thickness from their brain T1 weighted images. Based on the inter-regional cortical thickness correlations, we generated SCNs and used graph theoretical measures to assess differences between the two groups in terms of network integration, segregation, and modularity. RESULTS: The average local efficiency, a measure of network segregation, of BDNF Met carriers’ network was significantly higher than that of the Val homozygotes’ (permutation p-value = 0.002). Average shortest path lengths (a measure of integration), average local clustering coefficient (another measure of network segregation), small-worldness (a balance between integration and segregation), and modularity (a representative measure for modular architecture) were not significantly different between group (permutation p-values ≧ 0.01). DISCUSSION AND CONCLUSION: Our results suggest that the BDNF Val66Met polymorphism may potentially influence the pattern of brain regional morphometric (cortical thickness) correlations. Comparing networks derived from inter-regional cortical thickness correlations, Met carrier SCNs have denser connections with neighbors and are more distant from random networks than Val homozygote networks. Thus, it may be necessary to consider potential effects of BDNF gene mutations in SCN analyses. This is the first study to demonstrate a difference between Val homozygotes and Met carriers in brain SCNs. PeerJ Inc. 2020-08-05 /pmc/articles/PMC7414771/ /pubmed/32844059 http://dx.doi.org/10.7717/peerj.9632 Text en ©2020 Ueda et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Ueda, Issei
Takemoto, Kazuhiro
Watanabe, Keita
Sugimoto, Koichiro
Ikenouchi, Atsuko
Kakeda, Shingo
Katsuki, Asuka
Yoshimura, Reiji
Korogi, Yukunori
The brain-derived neurotrophic factor Val66Met polymorphism increases segregation of structural correlation networks in healthy adult brains
title The brain-derived neurotrophic factor Val66Met polymorphism increases segregation of structural correlation networks in healthy adult brains
title_full The brain-derived neurotrophic factor Val66Met polymorphism increases segregation of structural correlation networks in healthy adult brains
title_fullStr The brain-derived neurotrophic factor Val66Met polymorphism increases segregation of structural correlation networks in healthy adult brains
title_full_unstemmed The brain-derived neurotrophic factor Val66Met polymorphism increases segregation of structural correlation networks in healthy adult brains
title_short The brain-derived neurotrophic factor Val66Met polymorphism increases segregation of structural correlation networks in healthy adult brains
title_sort brain-derived neurotrophic factor val66met polymorphism increases segregation of structural correlation networks in healthy adult brains
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7414771/
https://www.ncbi.nlm.nih.gov/pubmed/32844059
http://dx.doi.org/10.7717/peerj.9632
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