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Deep learning‐guided joint attenuation and scatter correction in multitracer neuroimaging studies

PET attenuation correction (AC) on systems lacking CT/transmission scanning, such as dedicated brain PET scanners and hybrid PET/MRI, is challenging. Direct AC in image‐space, wherein PET images corrected for attenuation and scatter are synthesized from nonattenuation corrected PET (PET‐nonAC) image...

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Autores principales: Arabi, Hossein, Bortolin, Karin, Ginovart, Nathalie, Garibotto, Valentina, Zaidi, Habib
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7416024/
https://www.ncbi.nlm.nih.gov/pubmed/32436261
http://dx.doi.org/10.1002/hbm.25039
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author Arabi, Hossein
Bortolin, Karin
Ginovart, Nathalie
Garibotto, Valentina
Zaidi, Habib
author_facet Arabi, Hossein
Bortolin, Karin
Ginovart, Nathalie
Garibotto, Valentina
Zaidi, Habib
author_sort Arabi, Hossein
collection PubMed
description PET attenuation correction (AC) on systems lacking CT/transmission scanning, such as dedicated brain PET scanners and hybrid PET/MRI, is challenging. Direct AC in image‐space, wherein PET images corrected for attenuation and scatter are synthesized from nonattenuation corrected PET (PET‐nonAC) images in an end‐to‐end fashion using deep learning approaches (DLAC) is evaluated for various radiotracers used in molecular neuroimaging studies. One hundred eighty brain PET scans acquired using (18)F‐FDG, (18)F‐DOPA, (18)F‐Flortaucipir (targeting tau pathology), and (18)F‐Flutemetamol (targeting amyloid pathology) radiotracers (40 + 5, training/validation + external test, subjects for each radiotracer) were included. The PET data were reconstructed using CT‐based AC (CTAC) to generate reference PET‐CTAC and without AC to produce PET‐nonAC images. A deep convolutional neural network was trained to generate PET attenuation corrected images (PET‐DLAC) from PET‐nonAC. The quantitative accuracy of this approach was investigated separately for each radiotracer considering the values obtained from PET‐CTAC images as reference. A segmented AC map (PET‐SegAC) containing soft‐tissue and background air was also included in the evaluation. Quantitative analysis of PET images demonstrated superior performance of the DLAC approach compared to SegAC technique for all tracers. Despite the relatively low quantitative bias observed when using the DLAC approach, this approach appears vulnerable to outliers, resulting in noticeable local pseudo uptake and false cold regions. Direct AC in image‐space using deep learning demonstrated quantitatively acceptable performance with less than 9% absolute SUV bias for the four different investigated neuroimaging radiotracers. However, this approach is vulnerable to outliers which result in large local quantitative bias.
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spelling pubmed-74160242020-08-10 Deep learning‐guided joint attenuation and scatter correction in multitracer neuroimaging studies Arabi, Hossein Bortolin, Karin Ginovart, Nathalie Garibotto, Valentina Zaidi, Habib Hum Brain Mapp Research Articles PET attenuation correction (AC) on systems lacking CT/transmission scanning, such as dedicated brain PET scanners and hybrid PET/MRI, is challenging. Direct AC in image‐space, wherein PET images corrected for attenuation and scatter are synthesized from nonattenuation corrected PET (PET‐nonAC) images in an end‐to‐end fashion using deep learning approaches (DLAC) is evaluated for various radiotracers used in molecular neuroimaging studies. One hundred eighty brain PET scans acquired using (18)F‐FDG, (18)F‐DOPA, (18)F‐Flortaucipir (targeting tau pathology), and (18)F‐Flutemetamol (targeting amyloid pathology) radiotracers (40 + 5, training/validation + external test, subjects for each radiotracer) were included. The PET data were reconstructed using CT‐based AC (CTAC) to generate reference PET‐CTAC and without AC to produce PET‐nonAC images. A deep convolutional neural network was trained to generate PET attenuation corrected images (PET‐DLAC) from PET‐nonAC. The quantitative accuracy of this approach was investigated separately for each radiotracer considering the values obtained from PET‐CTAC images as reference. A segmented AC map (PET‐SegAC) containing soft‐tissue and background air was also included in the evaluation. Quantitative analysis of PET images demonstrated superior performance of the DLAC approach compared to SegAC technique for all tracers. Despite the relatively low quantitative bias observed when using the DLAC approach, this approach appears vulnerable to outliers, resulting in noticeable local pseudo uptake and false cold regions. Direct AC in image‐space using deep learning demonstrated quantitatively acceptable performance with less than 9% absolute SUV bias for the four different investigated neuroimaging radiotracers. However, this approach is vulnerable to outliers which result in large local quantitative bias. John Wiley & Sons, Inc. 2020-05-21 /pmc/articles/PMC7416024/ /pubmed/32436261 http://dx.doi.org/10.1002/hbm.25039 Text en © 2020 The Authors. Human Brain Mapping published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research Articles
Arabi, Hossein
Bortolin, Karin
Ginovart, Nathalie
Garibotto, Valentina
Zaidi, Habib
Deep learning‐guided joint attenuation and scatter correction in multitracer neuroimaging studies
title Deep learning‐guided joint attenuation and scatter correction in multitracer neuroimaging studies
title_full Deep learning‐guided joint attenuation and scatter correction in multitracer neuroimaging studies
title_fullStr Deep learning‐guided joint attenuation and scatter correction in multitracer neuroimaging studies
title_full_unstemmed Deep learning‐guided joint attenuation and scatter correction in multitracer neuroimaging studies
title_short Deep learning‐guided joint attenuation and scatter correction in multitracer neuroimaging studies
title_sort deep learning‐guided joint attenuation and scatter correction in multitracer neuroimaging studies
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7416024/
https://www.ncbi.nlm.nih.gov/pubmed/32436261
http://dx.doi.org/10.1002/hbm.25039
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