Cargando…

The reconstruction and biochemical characterization of ancestral genes furnish insights into the evolution of terpene synthase function in the Poaceae

KEY MESSAGE: Distinct catalytic features of the Poaceae TPS-a subfamily arose early in grass evolution and the reactions catalyzed have become more complex with time. ABSTRACT: The structural diversity of terpenes found in nature is mainly determined by terpene synthases (TPS). TPS enzymes accept ub...

Descripción completa

Detalles Bibliográficos
Autores principales: Luck, Katrin, Chen, Xinlu, Norris, Ayla M., Chen, Feng, Gershenzon, Jonathan, Köllner, Tobias G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7417412/
https://www.ncbi.nlm.nih.gov/pubmed/32683610
http://dx.doi.org/10.1007/s11103-020-01037-4
_version_ 1783569487144943616
author Luck, Katrin
Chen, Xinlu
Norris, Ayla M.
Chen, Feng
Gershenzon, Jonathan
Köllner, Tobias G.
author_facet Luck, Katrin
Chen, Xinlu
Norris, Ayla M.
Chen, Feng
Gershenzon, Jonathan
Köllner, Tobias G.
author_sort Luck, Katrin
collection PubMed
description KEY MESSAGE: Distinct catalytic features of the Poaceae TPS-a subfamily arose early in grass evolution and the reactions catalyzed have become more complex with time. ABSTRACT: The structural diversity of terpenes found in nature is mainly determined by terpene synthases (TPS). TPS enzymes accept ubiquitous prenyl diphosphates as substrates and convert them into the various terpene skeletons by catalyzing a carbocation-driven reaction. Based on their sequence similarity, terpene synthases from land plants can be divided into different subfamilies, TPS-a to TPS-h. In this study, we aimed to understand the evolution and functional diversification of the TPS-a subfamily in the Poaceae (the grass family), a plant family that contains important crops such as maize, wheat, rice, and sorghum. Sequence comparisons showed that aside from one clade shared with other monocot plants, the Poaceae TPS-a subfamily consists of five well-defined clades I–V, the common ancestor of which probably originated very early in the evolution of the grasses. A survey of the TPS literature and the characterization of representative TPS enzymes from clades I–III revealed clade-specific substrate and product specificities. The enzymes in both clade I and II function as sesquiterpene synthases with clade I enzymes catalyzing initial C10-C1 or C11-C1 ring closures and clade II enzymes catalyzing C6-C1 closures. The enzymes of clade III mainly act as monoterpene synthases, forming cyclic and acyclic monoterpenes. The reconstruction and characterization of clade ancestors demonstrated that the differences among clades I–III were already present in their ancestors. However, the ancestors generally catalyzed simpler reactions with less double-bond isomerization and fewer cyclization steps. Overall, our data indicate an early origin of key enzymatic features of TPS-a enzymes in the Poaceae, and the development of more complex reactions over the course of evolution. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s11103-020-01037-4) contains supplementary material, which is available to authorized users.
format Online
Article
Text
id pubmed-7417412
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Springer Netherlands
record_format MEDLINE/PubMed
spelling pubmed-74174122020-08-17 The reconstruction and biochemical characterization of ancestral genes furnish insights into the evolution of terpene synthase function in the Poaceae Luck, Katrin Chen, Xinlu Norris, Ayla M. Chen, Feng Gershenzon, Jonathan Köllner, Tobias G. Plant Mol Biol Article KEY MESSAGE: Distinct catalytic features of the Poaceae TPS-a subfamily arose early in grass evolution and the reactions catalyzed have become more complex with time. ABSTRACT: The structural diversity of terpenes found in nature is mainly determined by terpene synthases (TPS). TPS enzymes accept ubiquitous prenyl diphosphates as substrates and convert them into the various terpene skeletons by catalyzing a carbocation-driven reaction. Based on their sequence similarity, terpene synthases from land plants can be divided into different subfamilies, TPS-a to TPS-h. In this study, we aimed to understand the evolution and functional diversification of the TPS-a subfamily in the Poaceae (the grass family), a plant family that contains important crops such as maize, wheat, rice, and sorghum. Sequence comparisons showed that aside from one clade shared with other monocot plants, the Poaceae TPS-a subfamily consists of five well-defined clades I–V, the common ancestor of which probably originated very early in the evolution of the grasses. A survey of the TPS literature and the characterization of representative TPS enzymes from clades I–III revealed clade-specific substrate and product specificities. The enzymes in both clade I and II function as sesquiterpene synthases with clade I enzymes catalyzing initial C10-C1 or C11-C1 ring closures and clade II enzymes catalyzing C6-C1 closures. The enzymes of clade III mainly act as monoterpene synthases, forming cyclic and acyclic monoterpenes. The reconstruction and characterization of clade ancestors demonstrated that the differences among clades I–III were already present in their ancestors. However, the ancestors generally catalyzed simpler reactions with less double-bond isomerization and fewer cyclization steps. Overall, our data indicate an early origin of key enzymatic features of TPS-a enzymes in the Poaceae, and the development of more complex reactions over the course of evolution. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s11103-020-01037-4) contains supplementary material, which is available to authorized users. Springer Netherlands 2020-07-18 2020 /pmc/articles/PMC7417412/ /pubmed/32683610 http://dx.doi.org/10.1007/s11103-020-01037-4 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Luck, Katrin
Chen, Xinlu
Norris, Ayla M.
Chen, Feng
Gershenzon, Jonathan
Köllner, Tobias G.
The reconstruction and biochemical characterization of ancestral genes furnish insights into the evolution of terpene synthase function in the Poaceae
title The reconstruction and biochemical characterization of ancestral genes furnish insights into the evolution of terpene synthase function in the Poaceae
title_full The reconstruction and biochemical characterization of ancestral genes furnish insights into the evolution of terpene synthase function in the Poaceae
title_fullStr The reconstruction and biochemical characterization of ancestral genes furnish insights into the evolution of terpene synthase function in the Poaceae
title_full_unstemmed The reconstruction and biochemical characterization of ancestral genes furnish insights into the evolution of terpene synthase function in the Poaceae
title_short The reconstruction and biochemical characterization of ancestral genes furnish insights into the evolution of terpene synthase function in the Poaceae
title_sort reconstruction and biochemical characterization of ancestral genes furnish insights into the evolution of terpene synthase function in the poaceae
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7417412/
https://www.ncbi.nlm.nih.gov/pubmed/32683610
http://dx.doi.org/10.1007/s11103-020-01037-4
work_keys_str_mv AT luckkatrin thereconstructionandbiochemicalcharacterizationofancestralgenesfurnishinsightsintotheevolutionofterpenesynthasefunctioninthepoaceae
AT chenxinlu thereconstructionandbiochemicalcharacterizationofancestralgenesfurnishinsightsintotheevolutionofterpenesynthasefunctioninthepoaceae
AT norrisaylam thereconstructionandbiochemicalcharacterizationofancestralgenesfurnishinsightsintotheevolutionofterpenesynthasefunctioninthepoaceae
AT chenfeng thereconstructionandbiochemicalcharacterizationofancestralgenesfurnishinsightsintotheevolutionofterpenesynthasefunctioninthepoaceae
AT gershenzonjonathan thereconstructionandbiochemicalcharacterizationofancestralgenesfurnishinsightsintotheevolutionofterpenesynthasefunctioninthepoaceae
AT kollnertobiasg thereconstructionandbiochemicalcharacterizationofancestralgenesfurnishinsightsintotheevolutionofterpenesynthasefunctioninthepoaceae
AT luckkatrin reconstructionandbiochemicalcharacterizationofancestralgenesfurnishinsightsintotheevolutionofterpenesynthasefunctioninthepoaceae
AT chenxinlu reconstructionandbiochemicalcharacterizationofancestralgenesfurnishinsightsintotheevolutionofterpenesynthasefunctioninthepoaceae
AT norrisaylam reconstructionandbiochemicalcharacterizationofancestralgenesfurnishinsightsintotheevolutionofterpenesynthasefunctioninthepoaceae
AT chenfeng reconstructionandbiochemicalcharacterizationofancestralgenesfurnishinsightsintotheevolutionofterpenesynthasefunctioninthepoaceae
AT gershenzonjonathan reconstructionandbiochemicalcharacterizationofancestralgenesfurnishinsightsintotheevolutionofterpenesynthasefunctioninthepoaceae
AT kollnertobiasg reconstructionandbiochemicalcharacterizationofancestralgenesfurnishinsightsintotheevolutionofterpenesynthasefunctioninthepoaceae