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High-throughput phenotyping platform for analyzing drought tolerance in rice

MAIN CONCLUSION: A new imaging platform was constructed to analyze drought-tolerant traits of rice. Rice was used to quantify drought phenotypes through image-based parameters and analyzing tools. ABSTRACT: Climate change has increased the frequency and severity of drought, which limits crop product...

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Autores principales: Kim, Song Lim, Kim, Nyunhee, Lee, Hongseok, Lee, Eungyeong, Cheon, Kyeong-Seong, Kim, Minsu, Baek, JeongHo, Choi, Inchan, Ji, Hyeonso, Yoon, In Sun, Jung, Ki-Hong, Kwon, Taek-Ryoun, Kim, Kyung-Hwan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7417419/
https://www.ncbi.nlm.nih.gov/pubmed/32779032
http://dx.doi.org/10.1007/s00425-020-03436-9
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author Kim, Song Lim
Kim, Nyunhee
Lee, Hongseok
Lee, Eungyeong
Cheon, Kyeong-Seong
Kim, Minsu
Baek, JeongHo
Choi, Inchan
Ji, Hyeonso
Yoon, In Sun
Jung, Ki-Hong
Kwon, Taek-Ryoun
Kim, Kyung-Hwan
author_facet Kim, Song Lim
Kim, Nyunhee
Lee, Hongseok
Lee, Eungyeong
Cheon, Kyeong-Seong
Kim, Minsu
Baek, JeongHo
Choi, Inchan
Ji, Hyeonso
Yoon, In Sun
Jung, Ki-Hong
Kwon, Taek-Ryoun
Kim, Kyung-Hwan
author_sort Kim, Song Lim
collection PubMed
description MAIN CONCLUSION: A new imaging platform was constructed to analyze drought-tolerant traits of rice. Rice was used to quantify drought phenotypes through image-based parameters and analyzing tools. ABSTRACT: Climate change has increased the frequency and severity of drought, which limits crop production worldwide. Developing new cultivars with increased drought tolerance and short breeding cycles is critical. However, achieving this goal requires phenotyping a large number of breeding populations in a short time and in an accurate manner. Novel cutting-edge technologies such as those based on remote sensors are being applied to solve this problem. In this study, new technologies were applied to obtain and analyze imaging data and establish efficient screening platforms for drought tolerance in rice using the drought-tolerant mutant osphyb. Red–Green–Blue images were used to predict plant area, color, and compactness. Near-infrared imaging was used to determine the water content of rice, infrared was used to assess plant temperature, and fluorescence was used to examine photosynthesis efficiency. DroughtSpotter technology was used to determine water use efficiency, plant water loss rate, and transpiration rate. The results indicate that these methods can detect the difference between tolerant and susceptible plants, suggesting their value as high-throughput phenotyping methods for short breeding cycles as well as for functional genetic studies of tolerance to drought stress. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00425-020-03436-9) contains supplementary material, which is available to authorized users.
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spelling pubmed-74174192020-08-17 High-throughput phenotyping platform for analyzing drought tolerance in rice Kim, Song Lim Kim, Nyunhee Lee, Hongseok Lee, Eungyeong Cheon, Kyeong-Seong Kim, Minsu Baek, JeongHo Choi, Inchan Ji, Hyeonso Yoon, In Sun Jung, Ki-Hong Kwon, Taek-Ryoun Kim, Kyung-Hwan Planta Original Article MAIN CONCLUSION: A new imaging platform was constructed to analyze drought-tolerant traits of rice. Rice was used to quantify drought phenotypes through image-based parameters and analyzing tools. ABSTRACT: Climate change has increased the frequency and severity of drought, which limits crop production worldwide. Developing new cultivars with increased drought tolerance and short breeding cycles is critical. However, achieving this goal requires phenotyping a large number of breeding populations in a short time and in an accurate manner. Novel cutting-edge technologies such as those based on remote sensors are being applied to solve this problem. In this study, new technologies were applied to obtain and analyze imaging data and establish efficient screening platforms for drought tolerance in rice using the drought-tolerant mutant osphyb. Red–Green–Blue images were used to predict plant area, color, and compactness. Near-infrared imaging was used to determine the water content of rice, infrared was used to assess plant temperature, and fluorescence was used to examine photosynthesis efficiency. DroughtSpotter technology was used to determine water use efficiency, plant water loss rate, and transpiration rate. The results indicate that these methods can detect the difference between tolerant and susceptible plants, suggesting their value as high-throughput phenotyping methods for short breeding cycles as well as for functional genetic studies of tolerance to drought stress. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00425-020-03436-9) contains supplementary material, which is available to authorized users. Springer Berlin Heidelberg 2020-08-10 2020 /pmc/articles/PMC7417419/ /pubmed/32779032 http://dx.doi.org/10.1007/s00425-020-03436-9 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Original Article
Kim, Song Lim
Kim, Nyunhee
Lee, Hongseok
Lee, Eungyeong
Cheon, Kyeong-Seong
Kim, Minsu
Baek, JeongHo
Choi, Inchan
Ji, Hyeonso
Yoon, In Sun
Jung, Ki-Hong
Kwon, Taek-Ryoun
Kim, Kyung-Hwan
High-throughput phenotyping platform for analyzing drought tolerance in rice
title High-throughput phenotyping platform for analyzing drought tolerance in rice
title_full High-throughput phenotyping platform for analyzing drought tolerance in rice
title_fullStr High-throughput phenotyping platform for analyzing drought tolerance in rice
title_full_unstemmed High-throughput phenotyping platform for analyzing drought tolerance in rice
title_short High-throughput phenotyping platform for analyzing drought tolerance in rice
title_sort high-throughput phenotyping platform for analyzing drought tolerance in rice
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7417419/
https://www.ncbi.nlm.nih.gov/pubmed/32779032
http://dx.doi.org/10.1007/s00425-020-03436-9
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