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Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury
IMPORTANCE: Acute kidney injury (AKI) is associated with increased morbidity and mortality in hospitalized patients. Current methods to identify patients at high risk of AKI are limited, and few prediction models have been externally validated. OBJECTIVE: To internally and externally validate a mach...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Medical Association
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7420241/ https://www.ncbi.nlm.nih.gov/pubmed/32780123 http://dx.doi.org/10.1001/jamanetworkopen.2020.12892 |
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author | Churpek, Matthew M. Carey, Kyle A. Edelson, Dana P. Singh, Tripti Astor, Brad C. Gilbert, Emily R. Winslow, Christopher Shah, Nirav Afshar, Majid Koyner, Jay L. |
author_facet | Churpek, Matthew M. Carey, Kyle A. Edelson, Dana P. Singh, Tripti Astor, Brad C. Gilbert, Emily R. Winslow, Christopher Shah, Nirav Afshar, Majid Koyner, Jay L. |
author_sort | Churpek, Matthew M. |
collection | PubMed |
description | IMPORTANCE: Acute kidney injury (AKI) is associated with increased morbidity and mortality in hospitalized patients. Current methods to identify patients at high risk of AKI are limited, and few prediction models have been externally validated. OBJECTIVE: To internally and externally validate a machine learning risk score to detect AKI in hospitalized patients. DESIGN, SETTING, AND PARTICIPANTS: This diagnostic study included 495 971 adult hospital admissions at the University of Chicago (UC) from 2008 to 2016 (n = 48 463), at Loyola University Medical Center (LUMC) from 2007 to 2017 (n = 200 613), and at NorthShore University Health System (NUS) from 2006 to 2016 (n = 246 895) with serum creatinine (SCr) measurements. Patients with an SCr concentration at admission greater than 3.0 mg/dL, with a prior diagnostic code for chronic kidney disease stage 4 or higher, or who received kidney replacement therapy within 48 hours of admission were excluded. A simplified version of a previously published gradient boosted machine AKI prediction algorithm was used; it was validated internally among patients at UC and externally among patients at NUS and LUMC. MAIN OUTCOMES AND MEASURES: Prediction of Kidney Disease Improving Global Outcomes SCr-defined stage 2 AKI within a 48-hour interval was the primary outcome. Discrimination was assessed by the area under the receiver operating characteristic curve (AUC). RESULTS: The study included 495 971 adult admissions (mean [SD] age, 63 [18] years; 87 689 [17.7%] African American; and 266 866 [53.8%] women) across 3 health systems. The development of stage 2 or higher AKI occurred in 15 664 of 48 463 patients (3.4%) in the UC cohort, 5711 of 200 613 (2.8%) in the LUMC cohort, and 3499 of 246 895 (1.4%) in the NUS cohort. In the UC cohort, 332 patients (0.7%) required kidney replacement therapy compared with 672 patients (0.3%) in the LUMC cohort and 440 patients (0.2%) in the NUS cohort. The AUCs for predicting at least stage 2 AKI in the next 48 hours were 0.86 (95% CI, 0.86-0.86) in the UC cohort, 0.85 (95% CI, 0.84-0.85) in the LUMC cohort, and 0.86 (95% CI, 0.86-0.86) in the NUS cohort. The AUCs for receipt of kidney replacement therapy within 48 hours were 0.96 (95% CI, 0.96-0.96) in the UC cohort, 0.95 (95% CI, 0.94-0.95) in the LUMC cohort, and 0.95 (95% CI, 0.94-0.95) in the NUS cohort. In time-to-event analysis, a probability cutoff of at least 0.057 predicted the onset of stage 2 AKI a median (IQR) of 27 (6.5-93) hours before the eventual doubling in SCr concentrations in the UC cohort, 34.5 (19-85) hours in the NUS cohort, and 39 (19-108) hours in the LUMC cohort. CONCLUSIONS AND RELEVANCE: In this study, the machine learning algorithm demonstrated excellent discrimination in both internal and external validation, supporting its generalizability and potential as a clinical decision support tool to improve AKI detection and outcomes. |
format | Online Article Text |
id | pubmed-7420241 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | American Medical Association |
record_format | MEDLINE/PubMed |
spelling | pubmed-74202412020-08-18 Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury Churpek, Matthew M. Carey, Kyle A. Edelson, Dana P. Singh, Tripti Astor, Brad C. Gilbert, Emily R. Winslow, Christopher Shah, Nirav Afshar, Majid Koyner, Jay L. JAMA Netw Open Original Investigation IMPORTANCE: Acute kidney injury (AKI) is associated with increased morbidity and mortality in hospitalized patients. Current methods to identify patients at high risk of AKI are limited, and few prediction models have been externally validated. OBJECTIVE: To internally and externally validate a machine learning risk score to detect AKI in hospitalized patients. DESIGN, SETTING, AND PARTICIPANTS: This diagnostic study included 495 971 adult hospital admissions at the University of Chicago (UC) from 2008 to 2016 (n = 48 463), at Loyola University Medical Center (LUMC) from 2007 to 2017 (n = 200 613), and at NorthShore University Health System (NUS) from 2006 to 2016 (n = 246 895) with serum creatinine (SCr) measurements. Patients with an SCr concentration at admission greater than 3.0 mg/dL, with a prior diagnostic code for chronic kidney disease stage 4 or higher, or who received kidney replacement therapy within 48 hours of admission were excluded. A simplified version of a previously published gradient boosted machine AKI prediction algorithm was used; it was validated internally among patients at UC and externally among patients at NUS and LUMC. MAIN OUTCOMES AND MEASURES: Prediction of Kidney Disease Improving Global Outcomes SCr-defined stage 2 AKI within a 48-hour interval was the primary outcome. Discrimination was assessed by the area under the receiver operating characteristic curve (AUC). RESULTS: The study included 495 971 adult admissions (mean [SD] age, 63 [18] years; 87 689 [17.7%] African American; and 266 866 [53.8%] women) across 3 health systems. The development of stage 2 or higher AKI occurred in 15 664 of 48 463 patients (3.4%) in the UC cohort, 5711 of 200 613 (2.8%) in the LUMC cohort, and 3499 of 246 895 (1.4%) in the NUS cohort. In the UC cohort, 332 patients (0.7%) required kidney replacement therapy compared with 672 patients (0.3%) in the LUMC cohort and 440 patients (0.2%) in the NUS cohort. The AUCs for predicting at least stage 2 AKI in the next 48 hours were 0.86 (95% CI, 0.86-0.86) in the UC cohort, 0.85 (95% CI, 0.84-0.85) in the LUMC cohort, and 0.86 (95% CI, 0.86-0.86) in the NUS cohort. The AUCs for receipt of kidney replacement therapy within 48 hours were 0.96 (95% CI, 0.96-0.96) in the UC cohort, 0.95 (95% CI, 0.94-0.95) in the LUMC cohort, and 0.95 (95% CI, 0.94-0.95) in the NUS cohort. In time-to-event analysis, a probability cutoff of at least 0.057 predicted the onset of stage 2 AKI a median (IQR) of 27 (6.5-93) hours before the eventual doubling in SCr concentrations in the UC cohort, 34.5 (19-85) hours in the NUS cohort, and 39 (19-108) hours in the LUMC cohort. CONCLUSIONS AND RELEVANCE: In this study, the machine learning algorithm demonstrated excellent discrimination in both internal and external validation, supporting its generalizability and potential as a clinical decision support tool to improve AKI detection and outcomes. American Medical Association 2020-08-11 /pmc/articles/PMC7420241/ /pubmed/32780123 http://dx.doi.org/10.1001/jamanetworkopen.2020.12892 Text en Copyright 2020 Churpek MM et al. JAMA Network Open. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the CC-BY License. |
spellingShingle | Original Investigation Churpek, Matthew M. Carey, Kyle A. Edelson, Dana P. Singh, Tripti Astor, Brad C. Gilbert, Emily R. Winslow, Christopher Shah, Nirav Afshar, Majid Koyner, Jay L. Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury |
title | Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury |
title_full | Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury |
title_fullStr | Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury |
title_full_unstemmed | Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury |
title_short | Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury |
title_sort | internal and external validation of a machine learning risk score for acute kidney injury |
topic | Original Investigation |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7420241/ https://www.ncbi.nlm.nih.gov/pubmed/32780123 http://dx.doi.org/10.1001/jamanetworkopen.2020.12892 |
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