Cargando…

Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury

IMPORTANCE: Acute kidney injury (AKI) is associated with increased morbidity and mortality in hospitalized patients. Current methods to identify patients at high risk of AKI are limited, and few prediction models have been externally validated. OBJECTIVE: To internally and externally validate a mach...

Descripción completa

Detalles Bibliográficos
Autores principales: Churpek, Matthew M., Carey, Kyle A., Edelson, Dana P., Singh, Tripti, Astor, Brad C., Gilbert, Emily R., Winslow, Christopher, Shah, Nirav, Afshar, Majid, Koyner, Jay L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Medical Association 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7420241/
https://www.ncbi.nlm.nih.gov/pubmed/32780123
http://dx.doi.org/10.1001/jamanetworkopen.2020.12892
_version_ 1783569959438254080
author Churpek, Matthew M.
Carey, Kyle A.
Edelson, Dana P.
Singh, Tripti
Astor, Brad C.
Gilbert, Emily R.
Winslow, Christopher
Shah, Nirav
Afshar, Majid
Koyner, Jay L.
author_facet Churpek, Matthew M.
Carey, Kyle A.
Edelson, Dana P.
Singh, Tripti
Astor, Brad C.
Gilbert, Emily R.
Winslow, Christopher
Shah, Nirav
Afshar, Majid
Koyner, Jay L.
author_sort Churpek, Matthew M.
collection PubMed
description IMPORTANCE: Acute kidney injury (AKI) is associated with increased morbidity and mortality in hospitalized patients. Current methods to identify patients at high risk of AKI are limited, and few prediction models have been externally validated. OBJECTIVE: To internally and externally validate a machine learning risk score to detect AKI in hospitalized patients. DESIGN, SETTING, AND PARTICIPANTS: This diagnostic study included 495 971 adult hospital admissions at the University of Chicago (UC) from 2008 to 2016 (n = 48 463), at Loyola University Medical Center (LUMC) from 2007 to 2017 (n = 200 613), and at NorthShore University Health System (NUS) from 2006 to 2016 (n = 246 895) with serum creatinine (SCr) measurements. Patients with an SCr concentration at admission greater than 3.0 mg/dL, with a prior diagnostic code for chronic kidney disease stage 4 or higher, or who received kidney replacement therapy within 48 hours of admission were excluded. A simplified version of a previously published gradient boosted machine AKI prediction algorithm was used; it was validated internally among patients at UC and externally among patients at NUS and LUMC. MAIN OUTCOMES AND MEASURES: Prediction of Kidney Disease Improving Global Outcomes SCr-defined stage 2 AKI within a 48-hour interval was the primary outcome. Discrimination was assessed by the area under the receiver operating characteristic curve (AUC). RESULTS: The study included 495 971 adult admissions (mean [SD] age, 63 [18] years; 87 689 [17.7%] African American; and 266 866 [53.8%] women) across 3 health systems. The development of stage 2 or higher AKI occurred in 15 664 of 48 463 patients (3.4%) in the UC cohort, 5711 of 200 613 (2.8%) in the LUMC cohort, and 3499 of 246 895 (1.4%) in the NUS cohort. In the UC cohort, 332 patients (0.7%) required kidney replacement therapy compared with 672 patients (0.3%) in the LUMC cohort and 440 patients (0.2%) in the NUS cohort. The AUCs for predicting at least stage 2 AKI in the next 48 hours were 0.86 (95% CI, 0.86-0.86) in the UC cohort, 0.85 (95% CI, 0.84-0.85) in the LUMC cohort, and 0.86 (95% CI, 0.86-0.86) in the NUS cohort. The AUCs for receipt of kidney replacement therapy within 48 hours were 0.96 (95% CI, 0.96-0.96) in the UC cohort, 0.95 (95% CI, 0.94-0.95) in the LUMC cohort, and 0.95 (95% CI, 0.94-0.95) in the NUS cohort. In time-to-event analysis, a probability cutoff of at least 0.057 predicted the onset of stage 2 AKI a median (IQR) of 27 (6.5-93) hours before the eventual doubling in SCr concentrations in the UC cohort, 34.5 (19-85) hours in the NUS cohort, and 39 (19-108) hours in the LUMC cohort. CONCLUSIONS AND RELEVANCE: In this study, the machine learning algorithm demonstrated excellent discrimination in both internal and external validation, supporting its generalizability and potential as a clinical decision support tool to improve AKI detection and outcomes.
format Online
Article
Text
id pubmed-7420241
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher American Medical Association
record_format MEDLINE/PubMed
spelling pubmed-74202412020-08-18 Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury Churpek, Matthew M. Carey, Kyle A. Edelson, Dana P. Singh, Tripti Astor, Brad C. Gilbert, Emily R. Winslow, Christopher Shah, Nirav Afshar, Majid Koyner, Jay L. JAMA Netw Open Original Investigation IMPORTANCE: Acute kidney injury (AKI) is associated with increased morbidity and mortality in hospitalized patients. Current methods to identify patients at high risk of AKI are limited, and few prediction models have been externally validated. OBJECTIVE: To internally and externally validate a machine learning risk score to detect AKI in hospitalized patients. DESIGN, SETTING, AND PARTICIPANTS: This diagnostic study included 495 971 adult hospital admissions at the University of Chicago (UC) from 2008 to 2016 (n = 48 463), at Loyola University Medical Center (LUMC) from 2007 to 2017 (n = 200 613), and at NorthShore University Health System (NUS) from 2006 to 2016 (n = 246 895) with serum creatinine (SCr) measurements. Patients with an SCr concentration at admission greater than 3.0 mg/dL, with a prior diagnostic code for chronic kidney disease stage 4 or higher, or who received kidney replacement therapy within 48 hours of admission were excluded. A simplified version of a previously published gradient boosted machine AKI prediction algorithm was used; it was validated internally among patients at UC and externally among patients at NUS and LUMC. MAIN OUTCOMES AND MEASURES: Prediction of Kidney Disease Improving Global Outcomes SCr-defined stage 2 AKI within a 48-hour interval was the primary outcome. Discrimination was assessed by the area under the receiver operating characteristic curve (AUC). RESULTS: The study included 495 971 adult admissions (mean [SD] age, 63 [18] years; 87 689 [17.7%] African American; and 266 866 [53.8%] women) across 3 health systems. The development of stage 2 or higher AKI occurred in 15 664 of 48 463 patients (3.4%) in the UC cohort, 5711 of 200 613 (2.8%) in the LUMC cohort, and 3499 of 246 895 (1.4%) in the NUS cohort. In the UC cohort, 332 patients (0.7%) required kidney replacement therapy compared with 672 patients (0.3%) in the LUMC cohort and 440 patients (0.2%) in the NUS cohort. The AUCs for predicting at least stage 2 AKI in the next 48 hours were 0.86 (95% CI, 0.86-0.86) in the UC cohort, 0.85 (95% CI, 0.84-0.85) in the LUMC cohort, and 0.86 (95% CI, 0.86-0.86) in the NUS cohort. The AUCs for receipt of kidney replacement therapy within 48 hours were 0.96 (95% CI, 0.96-0.96) in the UC cohort, 0.95 (95% CI, 0.94-0.95) in the LUMC cohort, and 0.95 (95% CI, 0.94-0.95) in the NUS cohort. In time-to-event analysis, a probability cutoff of at least 0.057 predicted the onset of stage 2 AKI a median (IQR) of 27 (6.5-93) hours before the eventual doubling in SCr concentrations in the UC cohort, 34.5 (19-85) hours in the NUS cohort, and 39 (19-108) hours in the LUMC cohort. CONCLUSIONS AND RELEVANCE: In this study, the machine learning algorithm demonstrated excellent discrimination in both internal and external validation, supporting its generalizability and potential as a clinical decision support tool to improve AKI detection and outcomes. American Medical Association 2020-08-11 /pmc/articles/PMC7420241/ /pubmed/32780123 http://dx.doi.org/10.1001/jamanetworkopen.2020.12892 Text en Copyright 2020 Churpek MM et al. JAMA Network Open. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the CC-BY License.
spellingShingle Original Investigation
Churpek, Matthew M.
Carey, Kyle A.
Edelson, Dana P.
Singh, Tripti
Astor, Brad C.
Gilbert, Emily R.
Winslow, Christopher
Shah, Nirav
Afshar, Majid
Koyner, Jay L.
Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury
title Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury
title_full Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury
title_fullStr Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury
title_full_unstemmed Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury
title_short Internal and External Validation of a Machine Learning Risk Score for Acute Kidney Injury
title_sort internal and external validation of a machine learning risk score for acute kidney injury
topic Original Investigation
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7420241/
https://www.ncbi.nlm.nih.gov/pubmed/32780123
http://dx.doi.org/10.1001/jamanetworkopen.2020.12892
work_keys_str_mv AT churpekmatthewm internalandexternalvalidationofamachinelearningriskscoreforacutekidneyinjury
AT careykylea internalandexternalvalidationofamachinelearningriskscoreforacutekidneyinjury
AT edelsondanap internalandexternalvalidationofamachinelearningriskscoreforacutekidneyinjury
AT singhtripti internalandexternalvalidationofamachinelearningriskscoreforacutekidneyinjury
AT astorbradc internalandexternalvalidationofamachinelearningriskscoreforacutekidneyinjury
AT gilbertemilyr internalandexternalvalidationofamachinelearningriskscoreforacutekidneyinjury
AT winslowchristopher internalandexternalvalidationofamachinelearningriskscoreforacutekidneyinjury
AT shahnirav internalandexternalvalidationofamachinelearningriskscoreforacutekidneyinjury
AT afsharmajid internalandexternalvalidationofamachinelearningriskscoreforacutekidneyinjury
AT koynerjayl internalandexternalvalidationofamachinelearningriskscoreforacutekidneyinjury