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Transcriptomic dataset of wild type and phoP mutant Pectobacterium versatile
RNA-Seq transcriptome data for the wild type and phoP mutant strains of Pectobacterium versatile is described. P. versatile is a recently introduced name for a species of plant pathogenic bacteria that unites a group of strains previously embedded within the Pectobacterium carotovorum clade [1,2]. L...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7424204/ https://www.ncbi.nlm.nih.gov/pubmed/32817874 http://dx.doi.org/10.1016/j.dib.2020.106123 |
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author | Gogoleva, Natalia Kravchenko, Uljana Nikolaichik, Yevgeny Gogolev, Yuri |
author_facet | Gogoleva, Natalia Kravchenko, Uljana Nikolaichik, Yevgeny Gogolev, Yuri |
author_sort | Gogoleva, Natalia |
collection | PubMed |
description | RNA-Seq transcriptome data for the wild type and phoP mutant strains of Pectobacterium versatile is described. P. versatile is a recently introduced name for a species of plant pathogenic bacteria that unites a group of strains previously embedded within the Pectobacterium carotovorum clade [1,2]. Little detail is available about how this pathogen adapts to changing environmental conditions, including those within its host plant. The PhoP/PhoQ two-component system is an important sensor responding to several stimuli and is present in most species of enteric bacteria. It usually controls large regulons, which vary greatly even between closely related species [3]. This dataset enables the discovery of the genes under direct or indirect transcriptional control by PhoP in P. versatile and should help to understand the physiology of this plant pathogen. |
format | Online Article Text |
id | pubmed-7424204 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-74242042020-08-16 Transcriptomic dataset of wild type and phoP mutant Pectobacterium versatile Gogoleva, Natalia Kravchenko, Uljana Nikolaichik, Yevgeny Gogolev, Yuri Data Brief Genetics, Genomics and Molecular Biology RNA-Seq transcriptome data for the wild type and phoP mutant strains of Pectobacterium versatile is described. P. versatile is a recently introduced name for a species of plant pathogenic bacteria that unites a group of strains previously embedded within the Pectobacterium carotovorum clade [1,2]. Little detail is available about how this pathogen adapts to changing environmental conditions, including those within its host plant. The PhoP/PhoQ two-component system is an important sensor responding to several stimuli and is present in most species of enteric bacteria. It usually controls large regulons, which vary greatly even between closely related species [3]. This dataset enables the discovery of the genes under direct or indirect transcriptional control by PhoP in P. versatile and should help to understand the physiology of this plant pathogen. Elsevier 2020-08-02 /pmc/articles/PMC7424204/ /pubmed/32817874 http://dx.doi.org/10.1016/j.dib.2020.106123 Text en © 2020 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Genetics, Genomics and Molecular Biology Gogoleva, Natalia Kravchenko, Uljana Nikolaichik, Yevgeny Gogolev, Yuri Transcriptomic dataset of wild type and phoP mutant Pectobacterium versatile |
title | Transcriptomic dataset of wild type and phoP mutant Pectobacterium versatile |
title_full | Transcriptomic dataset of wild type and phoP mutant Pectobacterium versatile |
title_fullStr | Transcriptomic dataset of wild type and phoP mutant Pectobacterium versatile |
title_full_unstemmed | Transcriptomic dataset of wild type and phoP mutant Pectobacterium versatile |
title_short | Transcriptomic dataset of wild type and phoP mutant Pectobacterium versatile |
title_sort | transcriptomic dataset of wild type and phop mutant pectobacterium versatile |
topic | Genetics, Genomics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7424204/ https://www.ncbi.nlm.nih.gov/pubmed/32817874 http://dx.doi.org/10.1016/j.dib.2020.106123 |
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