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Analysis of the expression and genetic alteration of CLDN18 in gastric cancer
Claudin 18 (CLDN18) is a transmembrane protein that localizes to apical regions to form tight junction complexes. Abnormal expression of CLDN18 has been reported in gastric cancer (GC). The expression, genetic alterations, and prognostic role of CLDN18 were analyzed using public data from The Cancer...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7425459/ https://www.ncbi.nlm.nih.gov/pubmed/32668412 http://dx.doi.org/10.18632/aging.103457 |
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author | Li, Jian Zhang, Yao Hu, Dengmin Gong, Tuping Xu, Run Gao, Jun |
author_facet | Li, Jian Zhang, Yao Hu, Dengmin Gong, Tuping Xu, Run Gao, Jun |
author_sort | Li, Jian |
collection | PubMed |
description | Claudin 18 (CLDN18) is a transmembrane protein that localizes to apical regions to form tight junction complexes. Abnormal expression of CLDN18 has been reported in gastric cancer (GC). The expression, genetic alterations, and prognostic role of CLDN18 were analyzed using public data from The Cancer Genome Atlas (TCGA), Gene Expression Omnibus (GEO), and Human Protein Atlas (HPA) databases using multiple online tools. The biological network of CLDN18 was determined using GeneMANIA. Expression of CLDN18 was restricted to lung and stomach in normal tissues, was significantly downregulated in GC, but was ectopically overexpressed in some other cancer types. There was no correlation between mRNA expression of CLDN18 and the clinicopathology of GC, although expression was higher in the Epstein-Barr virus (EBV)-positive subgroup than other subgroups. Genetic alteration of CLDN18 was not a common event in GC; the main alteration was gene fusion with ARHGAP26. CLDN18 expression did not predict the overall survival (OS) of GC patients. This study summarizes the expression features of CLDN18 in GC and suggests it may serve as a biomarker and therapy target for GC. |
format | Online Article Text |
id | pubmed-7425459 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-74254592020-08-25 Analysis of the expression and genetic alteration of CLDN18 in gastric cancer Li, Jian Zhang, Yao Hu, Dengmin Gong, Tuping Xu, Run Gao, Jun Aging (Albany NY) Research Paper Claudin 18 (CLDN18) is a transmembrane protein that localizes to apical regions to form tight junction complexes. Abnormal expression of CLDN18 has been reported in gastric cancer (GC). The expression, genetic alterations, and prognostic role of CLDN18 were analyzed using public data from The Cancer Genome Atlas (TCGA), Gene Expression Omnibus (GEO), and Human Protein Atlas (HPA) databases using multiple online tools. The biological network of CLDN18 was determined using GeneMANIA. Expression of CLDN18 was restricted to lung and stomach in normal tissues, was significantly downregulated in GC, but was ectopically overexpressed in some other cancer types. There was no correlation between mRNA expression of CLDN18 and the clinicopathology of GC, although expression was higher in the Epstein-Barr virus (EBV)-positive subgroup than other subgroups. Genetic alteration of CLDN18 was not a common event in GC; the main alteration was gene fusion with ARHGAP26. CLDN18 expression did not predict the overall survival (OS) of GC patients. This study summarizes the expression features of CLDN18 in GC and suggests it may serve as a biomarker and therapy target for GC. Impact Journals 2020-07-15 /pmc/articles/PMC7425459/ /pubmed/32668412 http://dx.doi.org/10.18632/aging.103457 Text en Copyright © 2020 Li et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Li, Jian Zhang, Yao Hu, Dengmin Gong, Tuping Xu, Run Gao, Jun Analysis of the expression and genetic alteration of CLDN18 in gastric cancer |
title | Analysis of the expression and genetic alteration of CLDN18 in gastric cancer |
title_full | Analysis of the expression and genetic alteration of CLDN18 in gastric cancer |
title_fullStr | Analysis of the expression and genetic alteration of CLDN18 in gastric cancer |
title_full_unstemmed | Analysis of the expression and genetic alteration of CLDN18 in gastric cancer |
title_short | Analysis of the expression and genetic alteration of CLDN18 in gastric cancer |
title_sort | analysis of the expression and genetic alteration of cldn18 in gastric cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7425459/ https://www.ncbi.nlm.nih.gov/pubmed/32668412 http://dx.doi.org/10.18632/aging.103457 |
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