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Construction of a prognosis-predicting model based on autophagy-related genes for hepatocellular carcinoma (HCC) patients
Background: Autophagy, a highly conserved cellular catabolic process by which the eukaryotic cells deliver autophagosomes engulfing cellular proteins and organelles to lysosomes for degradation, is critical for maintaining cellular homeostasis in response to various signals and nutrient stresses. Th...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7425489/ https://www.ncbi.nlm.nih.gov/pubmed/32681721 http://dx.doi.org/10.18632/aging.103507 |
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author | Zhu, Yayun Wang, Ru Chen, Wanbin Chen, Qiuyu Zhou, Jian |
author_facet | Zhu, Yayun Wang, Ru Chen, Wanbin Chen, Qiuyu Zhou, Jian |
author_sort | Zhu, Yayun |
collection | PubMed |
description | Background: Autophagy, a highly conserved cellular catabolic process by which the eukaryotic cells deliver autophagosomes engulfing cellular proteins and organelles to lysosomes for degradation, is critical for maintaining cellular homeostasis in response to various signals and nutrient stresses. The dysregulation of autophagy has been noted in the pathogenesis of cancers. Our study aims to investigate the prognosis-predicting value of autophagy-related genes (ARG) in hepatocellular carcinoma (HCC). Results: The signature was constructed based on eight ARGs, which stratified HCC patients into high- and low-risk groups in terms of overall survival (OS) (Hazard Ratio, HR=4.641, 95% Confidential Interval, CI, 3.365-5.917, P=0.000). The ARG signature is an independent prognostic indicator for HCC patients (HR = 1.286, 95% CI, 1.194-1.385; P < 0.001). The area under the receiver operating characteristic (ROC) curve (AUC) for 5-year survival is 0.765. Conclusion: This study provides a potential prognostic signature for predicting the prognosis of HCC patients and molecular insights into the significance of autophagy in HCC. Methods: Sixty-two differentially expressed ARGs and the clinical characteristics and basic information of the 369 enrolled HCC patients were retrieved from The Cancer Genome Atlas (TCGA) database. the Cox proportional hazard regression analysis was adopted to identify survival-related ARGs, based on which a prognosis predicting signature was constructed. |
format | Online Article Text |
id | pubmed-7425489 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-74254892020-08-25 Construction of a prognosis-predicting model based on autophagy-related genes for hepatocellular carcinoma (HCC) patients Zhu, Yayun Wang, Ru Chen, Wanbin Chen, Qiuyu Zhou, Jian Aging (Albany NY) Research Paper Background: Autophagy, a highly conserved cellular catabolic process by which the eukaryotic cells deliver autophagosomes engulfing cellular proteins and organelles to lysosomes for degradation, is critical for maintaining cellular homeostasis in response to various signals and nutrient stresses. The dysregulation of autophagy has been noted in the pathogenesis of cancers. Our study aims to investigate the prognosis-predicting value of autophagy-related genes (ARG) in hepatocellular carcinoma (HCC). Results: The signature was constructed based on eight ARGs, which stratified HCC patients into high- and low-risk groups in terms of overall survival (OS) (Hazard Ratio, HR=4.641, 95% Confidential Interval, CI, 3.365-5.917, P=0.000). The ARG signature is an independent prognostic indicator for HCC patients (HR = 1.286, 95% CI, 1.194-1.385; P < 0.001). The area under the receiver operating characteristic (ROC) curve (AUC) for 5-year survival is 0.765. Conclusion: This study provides a potential prognostic signature for predicting the prognosis of HCC patients and molecular insights into the significance of autophagy in HCC. Methods: Sixty-two differentially expressed ARGs and the clinical characteristics and basic information of the 369 enrolled HCC patients were retrieved from The Cancer Genome Atlas (TCGA) database. the Cox proportional hazard regression analysis was adopted to identify survival-related ARGs, based on which a prognosis predicting signature was constructed. Impact Journals 2020-07-18 /pmc/articles/PMC7425489/ /pubmed/32681721 http://dx.doi.org/10.18632/aging.103507 Text en Copyright © 2020 Zhu et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Zhu, Yayun Wang, Ru Chen, Wanbin Chen, Qiuyu Zhou, Jian Construction of a prognosis-predicting model based on autophagy-related genes for hepatocellular carcinoma (HCC) patients |
title | Construction of a prognosis-predicting model based on autophagy-related genes for hepatocellular carcinoma (HCC) patients |
title_full | Construction of a prognosis-predicting model based on autophagy-related genes for hepatocellular carcinoma (HCC) patients |
title_fullStr | Construction of a prognosis-predicting model based on autophagy-related genes for hepatocellular carcinoma (HCC) patients |
title_full_unstemmed | Construction of a prognosis-predicting model based on autophagy-related genes for hepatocellular carcinoma (HCC) patients |
title_short | Construction of a prognosis-predicting model based on autophagy-related genes for hepatocellular carcinoma (HCC) patients |
title_sort | construction of a prognosis-predicting model based on autophagy-related genes for hepatocellular carcinoma (hcc) patients |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7425489/ https://www.ncbi.nlm.nih.gov/pubmed/32681721 http://dx.doi.org/10.18632/aging.103507 |
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