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Prediction of conversion to Alzheimer’s disease using deep survival analysis of MRI images

The prediction of the conversion of healthy individuals and those with mild cognitive impairment to the status of active Alzheimer’s disease is a challenging task. Recently, a survival analysis based upon deep learning was developed to enable predictions regarding the timing of an event in a dataset...

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Detalles Bibliográficos
Autores principales: Nakagawa, Tomonori, Ishida, Manabu, Naito, Junpei, Nagai, Atsushi, Yamaguchi, Shuhei, Onoda, Keiichi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7425528/
https://www.ncbi.nlm.nih.gov/pubmed/32954307
http://dx.doi.org/10.1093/braincomms/fcaa057
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author Nakagawa, Tomonori
Ishida, Manabu
Naito, Junpei
Nagai, Atsushi
Yamaguchi, Shuhei
Onoda, Keiichi
author_facet Nakagawa, Tomonori
Ishida, Manabu
Naito, Junpei
Nagai, Atsushi
Yamaguchi, Shuhei
Onoda, Keiichi
author_sort Nakagawa, Tomonori
collection PubMed
description The prediction of the conversion of healthy individuals and those with mild cognitive impairment to the status of active Alzheimer’s disease is a challenging task. Recently, a survival analysis based upon deep learning was developed to enable predictions regarding the timing of an event in a dataset containing censored data. Here, we investigated whether a deep survival analysis could similarly predict the conversion to Alzheimer’s disease. We selected individuals with mild cognitive impairment and cognitively normal subjects and used the grey matter volumes of brain regions in these subjects as predictive features. We then compared the prediction performances of the traditional standard Cox proportional-hazard model, the DeepHit model and our deep survival model based on a Weibull distribution. Our model achieved a maximum concordance index of 0.835, which was higher than that yielded by the Cox model and comparable to that of the DeepHit model. To our best knowledge, this is the first report to describe the application of a deep survival model to brain magnetic resonance imaging data. Our results demonstrate that this type of analysis could successfully predict the time of an individual’s conversion to Alzheimer’s disease.
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spelling pubmed-74255282020-09-17 Prediction of conversion to Alzheimer’s disease using deep survival analysis of MRI images Nakagawa, Tomonori Ishida, Manabu Naito, Junpei Nagai, Atsushi Yamaguchi, Shuhei Onoda, Keiichi Brain Commun Original Article The prediction of the conversion of healthy individuals and those with mild cognitive impairment to the status of active Alzheimer’s disease is a challenging task. Recently, a survival analysis based upon deep learning was developed to enable predictions regarding the timing of an event in a dataset containing censored data. Here, we investigated whether a deep survival analysis could similarly predict the conversion to Alzheimer’s disease. We selected individuals with mild cognitive impairment and cognitively normal subjects and used the grey matter volumes of brain regions in these subjects as predictive features. We then compared the prediction performances of the traditional standard Cox proportional-hazard model, the DeepHit model and our deep survival model based on a Weibull distribution. Our model achieved a maximum concordance index of 0.835, which was higher than that yielded by the Cox model and comparable to that of the DeepHit model. To our best knowledge, this is the first report to describe the application of a deep survival model to brain magnetic resonance imaging data. Our results demonstrate that this type of analysis could successfully predict the time of an individual’s conversion to Alzheimer’s disease. Oxford University Press 2020-05-27 /pmc/articles/PMC7425528/ /pubmed/32954307 http://dx.doi.org/10.1093/braincomms/fcaa057 Text en © The Author(s) (2020). Published by Oxford University Press on behalf of the Guarantors of Brain. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Original Article
Nakagawa, Tomonori
Ishida, Manabu
Naito, Junpei
Nagai, Atsushi
Yamaguchi, Shuhei
Onoda, Keiichi
Prediction of conversion to Alzheimer’s disease using deep survival analysis of MRI images
title Prediction of conversion to Alzheimer’s disease using deep survival analysis of MRI images
title_full Prediction of conversion to Alzheimer’s disease using deep survival analysis of MRI images
title_fullStr Prediction of conversion to Alzheimer’s disease using deep survival analysis of MRI images
title_full_unstemmed Prediction of conversion to Alzheimer’s disease using deep survival analysis of MRI images
title_short Prediction of conversion to Alzheimer’s disease using deep survival analysis of MRI images
title_sort prediction of conversion to alzheimer’s disease using deep survival analysis of mri images
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7425528/
https://www.ncbi.nlm.nih.gov/pubmed/32954307
http://dx.doi.org/10.1093/braincomms/fcaa057
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