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Short-term forecasts and long-term mitigation evaluations for the COVID-19 epidemic in Hubei Province, China
As an emerging infectious disease, the 2019 coronavirus disease (COVID-19) has developed into a global pandemic. During the initial spreading of the virus in China, we demonstrated the ensemble Kalman filter performed well as a short-term predictor of the daily cases reported in Wuhan City. Second,...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
KeAi Publishing
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7425645/ https://www.ncbi.nlm.nih.gov/pubmed/32835146 http://dx.doi.org/10.1016/j.idm.2020.08.001 |
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author | Yang, Qihui Yi, Chunlin Vajdi, Aram Cohnstaedt, Lee W. Wu, Hongyu Guo, Xiaolong Scoglio, Caterina M. |
author_facet | Yang, Qihui Yi, Chunlin Vajdi, Aram Cohnstaedt, Lee W. Wu, Hongyu Guo, Xiaolong Scoglio, Caterina M. |
author_sort | Yang, Qihui |
collection | PubMed |
description | As an emerging infectious disease, the 2019 coronavirus disease (COVID-19) has developed into a global pandemic. During the initial spreading of the virus in China, we demonstrated the ensemble Kalman filter performed well as a short-term predictor of the daily cases reported in Wuhan City. Second, we used an individual-level network-based model to reconstruct the epidemic dynamics in Hubei Province and examine the effectiveness of non-pharmaceutical interventions on the epidemic spreading with various scenarios. Our simulation results show that without continued control measures, the epidemic in Hubei Province could have become persistent. Only by continuing to decrease the infection rate through 1) protective measures and 2) social distancing can the actual epidemic trajectory that happened in Hubei Province be reconstructed in simulation. Finally, we simulate the COVID-19 transmission with non-Markovian processes and show how these models produce different epidemic trajectories, compared to those obtained with Markov processes. Since recent studies show that COVID-19 epidemiological parameters do not follow exponential distributions leading to Markov processes, future works need to focus on non-Markovian models to better capture the COVID-19 spreading trajectories. In addition, shortening the infectious period via early case identification and isolation can slow the epidemic spreading significantly. |
format | Online Article Text |
id | pubmed-7425645 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | KeAi Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-74256452020-08-14 Short-term forecasts and long-term mitigation evaluations for the COVID-19 epidemic in Hubei Province, China Yang, Qihui Yi, Chunlin Vajdi, Aram Cohnstaedt, Lee W. Wu, Hongyu Guo, Xiaolong Scoglio, Caterina M. Infect Dis Model Special issue on Modelling and Forecasting the 2019 Novel Coronavirus (2019-nCoV) Transmission; Edited by Prof. Carlos Castillo-Chavez, Prof. Gerardo Chowell-Puente, Prof. Ping Yan, Prof. Jianhong Wu As an emerging infectious disease, the 2019 coronavirus disease (COVID-19) has developed into a global pandemic. During the initial spreading of the virus in China, we demonstrated the ensemble Kalman filter performed well as a short-term predictor of the daily cases reported in Wuhan City. Second, we used an individual-level network-based model to reconstruct the epidemic dynamics in Hubei Province and examine the effectiveness of non-pharmaceutical interventions on the epidemic spreading with various scenarios. Our simulation results show that without continued control measures, the epidemic in Hubei Province could have become persistent. Only by continuing to decrease the infection rate through 1) protective measures and 2) social distancing can the actual epidemic trajectory that happened in Hubei Province be reconstructed in simulation. Finally, we simulate the COVID-19 transmission with non-Markovian processes and show how these models produce different epidemic trajectories, compared to those obtained with Markov processes. Since recent studies show that COVID-19 epidemiological parameters do not follow exponential distributions leading to Markov processes, future works need to focus on non-Markovian models to better capture the COVID-19 spreading trajectories. In addition, shortening the infectious period via early case identification and isolation can slow the epidemic spreading significantly. KeAi Publishing 2020-08-13 /pmc/articles/PMC7425645/ /pubmed/32835146 http://dx.doi.org/10.1016/j.idm.2020.08.001 Text en © 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Special issue on Modelling and Forecasting the 2019 Novel Coronavirus (2019-nCoV) Transmission; Edited by Prof. Carlos Castillo-Chavez, Prof. Gerardo Chowell-Puente, Prof. Ping Yan, Prof. Jianhong Wu Yang, Qihui Yi, Chunlin Vajdi, Aram Cohnstaedt, Lee W. Wu, Hongyu Guo, Xiaolong Scoglio, Caterina M. Short-term forecasts and long-term mitigation evaluations for the COVID-19 epidemic in Hubei Province, China |
title | Short-term forecasts and long-term mitigation evaluations for the COVID-19 epidemic in Hubei Province, China |
title_full | Short-term forecasts and long-term mitigation evaluations for the COVID-19 epidemic in Hubei Province, China |
title_fullStr | Short-term forecasts and long-term mitigation evaluations for the COVID-19 epidemic in Hubei Province, China |
title_full_unstemmed | Short-term forecasts and long-term mitigation evaluations for the COVID-19 epidemic in Hubei Province, China |
title_short | Short-term forecasts and long-term mitigation evaluations for the COVID-19 epidemic in Hubei Province, China |
title_sort | short-term forecasts and long-term mitigation evaluations for the covid-19 epidemic in hubei province, china |
topic | Special issue on Modelling and Forecasting the 2019 Novel Coronavirus (2019-nCoV) Transmission; Edited by Prof. Carlos Castillo-Chavez, Prof. Gerardo Chowell-Puente, Prof. Ping Yan, Prof. Jianhong Wu |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7425645/ https://www.ncbi.nlm.nih.gov/pubmed/32835146 http://dx.doi.org/10.1016/j.idm.2020.08.001 |
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