Cargando…

Data-Driven Parcellation Approaches Based on Functional Connectivity of Visual Cortices in Primary Open-Angle Glaucoma

PURPOSE: Functional changes have been observed between diseased and healthy subjects, and functional brain atlases derived from healthy populations may fail to reflect functional characteristic of the diseased brain. Therefore the aim of this study was to generate a visual atlas based on functional...

Descripción completa

Detalles Bibliográficos
Autores principales: Qu, Hanyang, Wang, Yi, Yan, Tingqin, Zhou, Jian, Lu, Weizhao, Qiu, Jianfeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7425746/
https://www.ncbi.nlm.nih.gov/pubmed/32716501
http://dx.doi.org/10.1167/iovs.61.8.33
_version_ 1783570555333509120
author Qu, Hanyang
Wang, Yi
Yan, Tingqin
Zhou, Jian
Lu, Weizhao
Qiu, Jianfeng
author_facet Qu, Hanyang
Wang, Yi
Yan, Tingqin
Zhou, Jian
Lu, Weizhao
Qiu, Jianfeng
author_sort Qu, Hanyang
collection PubMed
description PURPOSE: Functional changes have been observed between diseased and healthy subjects, and functional brain atlases derived from healthy populations may fail to reflect functional characteristic of the diseased brain. Therefore the aim of this study was to generate a visual atlas based on functional connectivity from primary open-angle glaucoma (POAG) patients and to prove the applicability of the visual atlas in functional connectivity and network analysis. METHODS: Functional magnetic resonance images were acquired from 36 POAG patients and 20 healthy controls. Two data-driven approaches, K-means and Ward clustering algorithms, were adopted for visual cortices parcellation. Dice coefficient and adjusted Rand index were used to assess reproducibility of the two approaches. Homogeneity index, silhouette coefficient, and network properties were adopted to assess functional validity for the data-driven approaches and frequently used brain atlas. Graph theoretical analysis was adopted to investigate altered network patterns in POAG patients based on data-driven visual atlas. RESULTS: Parcellation results demonstrated asymmetric patterns between left and right hemispheres in POAG patients compared with healthy controls. In terms of evaluating metrics, K-means performed better than Ward clustering in reproducibility. Data-driven parcellations outperformed frequently used brain atlases in terms of functional homogeneity and network properties. Graph theoretical analysis revealed that atlases generated by data-driven approaches were more conducive in detecting network alterations between POAG patients and healthy controls. CONCLUSIONS: Our findings suggested that POAG patients experienced functional alterations in the visual cortices. Results also highlighted the necessity of data-driven atlases for functional connectivity and functional network analysis of POAG brain.
format Online
Article
Text
id pubmed-7425746
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher The Association for Research in Vision and Ophthalmology
record_format MEDLINE/PubMed
spelling pubmed-74257462020-08-26 Data-Driven Parcellation Approaches Based on Functional Connectivity of Visual Cortices in Primary Open-Angle Glaucoma Qu, Hanyang Wang, Yi Yan, Tingqin Zhou, Jian Lu, Weizhao Qiu, Jianfeng Invest Ophthalmol Vis Sci Visual Neuroscience PURPOSE: Functional changes have been observed between diseased and healthy subjects, and functional brain atlases derived from healthy populations may fail to reflect functional characteristic of the diseased brain. Therefore the aim of this study was to generate a visual atlas based on functional connectivity from primary open-angle glaucoma (POAG) patients and to prove the applicability of the visual atlas in functional connectivity and network analysis. METHODS: Functional magnetic resonance images were acquired from 36 POAG patients and 20 healthy controls. Two data-driven approaches, K-means and Ward clustering algorithms, were adopted for visual cortices parcellation. Dice coefficient and adjusted Rand index were used to assess reproducibility of the two approaches. Homogeneity index, silhouette coefficient, and network properties were adopted to assess functional validity for the data-driven approaches and frequently used brain atlas. Graph theoretical analysis was adopted to investigate altered network patterns in POAG patients based on data-driven visual atlas. RESULTS: Parcellation results demonstrated asymmetric patterns between left and right hemispheres in POAG patients compared with healthy controls. In terms of evaluating metrics, K-means performed better than Ward clustering in reproducibility. Data-driven parcellations outperformed frequently used brain atlases in terms of functional homogeneity and network properties. Graph theoretical analysis revealed that atlases generated by data-driven approaches were more conducive in detecting network alterations between POAG patients and healthy controls. CONCLUSIONS: Our findings suggested that POAG patients experienced functional alterations in the visual cortices. Results also highlighted the necessity of data-driven atlases for functional connectivity and functional network analysis of POAG brain. The Association for Research in Vision and Ophthalmology 2020-07-27 /pmc/articles/PMC7425746/ /pubmed/32716501 http://dx.doi.org/10.1167/iovs.61.8.33 Text en Copyright 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
spellingShingle Visual Neuroscience
Qu, Hanyang
Wang, Yi
Yan, Tingqin
Zhou, Jian
Lu, Weizhao
Qiu, Jianfeng
Data-Driven Parcellation Approaches Based on Functional Connectivity of Visual Cortices in Primary Open-Angle Glaucoma
title Data-Driven Parcellation Approaches Based on Functional Connectivity of Visual Cortices in Primary Open-Angle Glaucoma
title_full Data-Driven Parcellation Approaches Based on Functional Connectivity of Visual Cortices in Primary Open-Angle Glaucoma
title_fullStr Data-Driven Parcellation Approaches Based on Functional Connectivity of Visual Cortices in Primary Open-Angle Glaucoma
title_full_unstemmed Data-Driven Parcellation Approaches Based on Functional Connectivity of Visual Cortices in Primary Open-Angle Glaucoma
title_short Data-Driven Parcellation Approaches Based on Functional Connectivity of Visual Cortices in Primary Open-Angle Glaucoma
title_sort data-driven parcellation approaches based on functional connectivity of visual cortices in primary open-angle glaucoma
topic Visual Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7425746/
https://www.ncbi.nlm.nih.gov/pubmed/32716501
http://dx.doi.org/10.1167/iovs.61.8.33
work_keys_str_mv AT quhanyang datadrivenparcellationapproachesbasedonfunctionalconnectivityofvisualcorticesinprimaryopenangleglaucoma
AT wangyi datadrivenparcellationapproachesbasedonfunctionalconnectivityofvisualcorticesinprimaryopenangleglaucoma
AT yantingqin datadrivenparcellationapproachesbasedonfunctionalconnectivityofvisualcorticesinprimaryopenangleglaucoma
AT zhoujian datadrivenparcellationapproachesbasedonfunctionalconnectivityofvisualcorticesinprimaryopenangleglaucoma
AT luweizhao datadrivenparcellationapproachesbasedonfunctionalconnectivityofvisualcorticesinprimaryopenangleglaucoma
AT qiujianfeng datadrivenparcellationapproachesbasedonfunctionalconnectivityofvisualcorticesinprimaryopenangleglaucoma