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Multiplexing information flow through dynamic signalling systems

We consider how a signalling system can act as an information hub by multiplexing information arising from multiple signals. We formally define multiplexing, mathematically characterise which systems can multiplex and how well they can do it. While the results of this paper are theoretical, to motiv...

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Detalles Bibliográficos
Autores principales: Minas, Giorgos, Woodcock, Dan J., Ashall, Louise, Harper, Claire V., White, Michael R. H., Rand, David A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7425991/
https://www.ncbi.nlm.nih.gov/pubmed/32745094
http://dx.doi.org/10.1371/journal.pcbi.1008076
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author Minas, Giorgos
Woodcock, Dan J.
Ashall, Louise
Harper, Claire V.
White, Michael R. H.
Rand, David A.
author_facet Minas, Giorgos
Woodcock, Dan J.
Ashall, Louise
Harper, Claire V.
White, Michael R. H.
Rand, David A.
author_sort Minas, Giorgos
collection PubMed
description We consider how a signalling system can act as an information hub by multiplexing information arising from multiple signals. We formally define multiplexing, mathematically characterise which systems can multiplex and how well they can do it. While the results of this paper are theoretical, to motivate the idea of multiplexing, we provide experimental evidence that tentatively suggests that the NF-κB transcription factor can multiplex information about changes in multiple signals. We believe that our theoretical results may resolve the apparent paradox of how a system like NF-κB that regulates cell fate and inflammatory signalling in response to diverse stimuli can appear to have the low information carrying capacity suggested by recent studies on scalar signals. In carrying out our study, we introduce new methods for the analysis of large, nonlinear stochastic dynamic models, and develop computational algorithms that facilitate the calculation of fundamental constructs of information theory such as Kullback–Leibler divergences and sensitivity matrices, and link these methods to a new theory about multiplexing information. We show that many current models such as those of the NF-κB system cannot multiplex effectively and provide models that overcome this limitation using post-transcriptional modifications.
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spelling pubmed-74259912020-08-20 Multiplexing information flow through dynamic signalling systems Minas, Giorgos Woodcock, Dan J. Ashall, Louise Harper, Claire V. White, Michael R. H. Rand, David A. PLoS Comput Biol Research Article We consider how a signalling system can act as an information hub by multiplexing information arising from multiple signals. We formally define multiplexing, mathematically characterise which systems can multiplex and how well they can do it. While the results of this paper are theoretical, to motivate the idea of multiplexing, we provide experimental evidence that tentatively suggests that the NF-κB transcription factor can multiplex information about changes in multiple signals. We believe that our theoretical results may resolve the apparent paradox of how a system like NF-κB that regulates cell fate and inflammatory signalling in response to diverse stimuli can appear to have the low information carrying capacity suggested by recent studies on scalar signals. In carrying out our study, we introduce new methods for the analysis of large, nonlinear stochastic dynamic models, and develop computational algorithms that facilitate the calculation of fundamental constructs of information theory such as Kullback–Leibler divergences and sensitivity matrices, and link these methods to a new theory about multiplexing information. We show that many current models such as those of the NF-κB system cannot multiplex effectively and provide models that overcome this limitation using post-transcriptional modifications. Public Library of Science 2020-08-03 /pmc/articles/PMC7425991/ /pubmed/32745094 http://dx.doi.org/10.1371/journal.pcbi.1008076 Text en © 2020 Minas et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Minas, Giorgos
Woodcock, Dan J.
Ashall, Louise
Harper, Claire V.
White, Michael R. H.
Rand, David A.
Multiplexing information flow through dynamic signalling systems
title Multiplexing information flow through dynamic signalling systems
title_full Multiplexing information flow through dynamic signalling systems
title_fullStr Multiplexing information flow through dynamic signalling systems
title_full_unstemmed Multiplexing information flow through dynamic signalling systems
title_short Multiplexing information flow through dynamic signalling systems
title_sort multiplexing information flow through dynamic signalling systems
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7425991/
https://www.ncbi.nlm.nih.gov/pubmed/32745094
http://dx.doi.org/10.1371/journal.pcbi.1008076
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