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A Real-Time PCR Assay for the Quantification of Plasmopara viticola Oospores in Grapevine Leaves

Grapevine downy mildew caused by Plasmopara viticola is one of the most important diseases in vineyards. Oospores that overwinter in the leaf litter above the soil are the sole source of inoculum for primary infections of P. viticola; in addition to triggering the first infections in the season, the...

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Autores principales: Si Ammour, Melissa, Bove, Federica, Toffolatti, Silvia Laura, Rossi, Vittorio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7426466/
https://www.ncbi.nlm.nih.gov/pubmed/32849746
http://dx.doi.org/10.3389/fpls.2020.01202
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author Si Ammour, Melissa
Bove, Federica
Toffolatti, Silvia Laura
Rossi, Vittorio
author_facet Si Ammour, Melissa
Bove, Federica
Toffolatti, Silvia Laura
Rossi, Vittorio
author_sort Si Ammour, Melissa
collection PubMed
description Grapevine downy mildew caused by Plasmopara viticola is one of the most important diseases in vineyards. Oospores that overwinter in the leaf litter above the soil are the sole source of inoculum for primary infections of P. viticola; in addition to triggering the first infections in the season, the oospores in leaf litter also contribute to disease development during the season. In the current study, a quantitative polymerase chain reaction (qPCR) method that was previously developed to detect P. viticola DNA in fresh grapevine leaves was assessed for its ability to quantify P. viticola oospores in diseased, senescent grapevine leaves. The qPCR assay was specific to P. viticola and sensitive to decreasing amounts of both genomic DNA and numbers of P. viticola oospores used to generate qPCR standard curves. When the qPCR assay was compared to microscope counts of oospores in leaves with different levels of P. viticola infestation, a strong linear relationship (R(2) = 0.70) was obtained between the numbers of P. viticola oospores per gram of leaves as determined by qPCR vs. microscopic observation. Unlike microscopic observation, the qPCR assay was able to detect significant differences between leaf samples with a low level of oospore infestation (25% infested leaves and 75% non-infested leaves) vs. samples without infestation, and this ability was not influenced by the weight of the leaf sample. The results indicate that the qPCR method is sensitive and provides reliable estimates of the number of P. viticola oospores in grapevine leaves. Additional research is needed to determine whether the qPCR method is useful for quantifying P. viticola oospores in grapevine leaf litter.
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spelling pubmed-74264662020-08-25 A Real-Time PCR Assay for the Quantification of Plasmopara viticola Oospores in Grapevine Leaves Si Ammour, Melissa Bove, Federica Toffolatti, Silvia Laura Rossi, Vittorio Front Plant Sci Plant Science Grapevine downy mildew caused by Plasmopara viticola is one of the most important diseases in vineyards. Oospores that overwinter in the leaf litter above the soil are the sole source of inoculum for primary infections of P. viticola; in addition to triggering the first infections in the season, the oospores in leaf litter also contribute to disease development during the season. In the current study, a quantitative polymerase chain reaction (qPCR) method that was previously developed to detect P. viticola DNA in fresh grapevine leaves was assessed for its ability to quantify P. viticola oospores in diseased, senescent grapevine leaves. The qPCR assay was specific to P. viticola and sensitive to decreasing amounts of both genomic DNA and numbers of P. viticola oospores used to generate qPCR standard curves. When the qPCR assay was compared to microscope counts of oospores in leaves with different levels of P. viticola infestation, a strong linear relationship (R(2) = 0.70) was obtained between the numbers of P. viticola oospores per gram of leaves as determined by qPCR vs. microscopic observation. Unlike microscopic observation, the qPCR assay was able to detect significant differences between leaf samples with a low level of oospore infestation (25% infested leaves and 75% non-infested leaves) vs. samples without infestation, and this ability was not influenced by the weight of the leaf sample. The results indicate that the qPCR method is sensitive and provides reliable estimates of the number of P. viticola oospores in grapevine leaves. Additional research is needed to determine whether the qPCR method is useful for quantifying P. viticola oospores in grapevine leaf litter. Frontiers Media S.A. 2020-08-07 /pmc/articles/PMC7426466/ /pubmed/32849746 http://dx.doi.org/10.3389/fpls.2020.01202 Text en Copyright © 2020 Si Ammour, Bove, Toffolatti and Rossi http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Si Ammour, Melissa
Bove, Federica
Toffolatti, Silvia Laura
Rossi, Vittorio
A Real-Time PCR Assay for the Quantification of Plasmopara viticola Oospores in Grapevine Leaves
title A Real-Time PCR Assay for the Quantification of Plasmopara viticola Oospores in Grapevine Leaves
title_full A Real-Time PCR Assay for the Quantification of Plasmopara viticola Oospores in Grapevine Leaves
title_fullStr A Real-Time PCR Assay for the Quantification of Plasmopara viticola Oospores in Grapevine Leaves
title_full_unstemmed A Real-Time PCR Assay for the Quantification of Plasmopara viticola Oospores in Grapevine Leaves
title_short A Real-Time PCR Assay for the Quantification of Plasmopara viticola Oospores in Grapevine Leaves
title_sort real-time pcr assay for the quantification of plasmopara viticola oospores in grapevine leaves
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7426466/
https://www.ncbi.nlm.nih.gov/pubmed/32849746
http://dx.doi.org/10.3389/fpls.2020.01202
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