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Reliable Computational Prediction of the Supramolecular Ordering of Complex Molecules under Electrochemical Conditions

[Image: see text] We propose a computationally lean, two-stage approach that reliably predicts self-assembly behavior of complex charged molecules on metallic surfaces under electrochemical conditions. Stage one uses ab initio simulations to provide reference data for the energies (evaluated for arc...

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Autores principales: Hartl, Benedikt, Sharma, Shubham, Brügner, Oliver, Mertens, Stijn F. L., Walter, Michael, Kahl, Gerhard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2020
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7426907/
https://www.ncbi.nlm.nih.gov/pubmed/32536160
http://dx.doi.org/10.1021/acs.jctc.9b01251
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author Hartl, Benedikt
Sharma, Shubham
Brügner, Oliver
Mertens, Stijn F. L.
Walter, Michael
Kahl, Gerhard
author_facet Hartl, Benedikt
Sharma, Shubham
Brügner, Oliver
Mertens, Stijn F. L.
Walter, Michael
Kahl, Gerhard
author_sort Hartl, Benedikt
collection PubMed
description [Image: see text] We propose a computationally lean, two-stage approach that reliably predicts self-assembly behavior of complex charged molecules on metallic surfaces under electrochemical conditions. Stage one uses ab initio simulations to provide reference data for the energies (evaluated for archetypical configurations) to fit the parameters of a conceptually much simpler and computationally less expensive force field of the molecules: classical, spherical particles, representing the respective atomic entities; a flat and perfectly conducting wall represents the metallic surface. Stage two feeds the energies that emerge from this force field into highly efficient and reliable optimization techniques to identify via energy minimization the ordered ground-state configurations of the molecules. We demonstrate the power of our approach by successfully reproducing, on a semiquantitative level, the intricate supramolecular ordering observed experimentally for PQP(+) and ClO(4)(–) molecules at an Au(111)–electrolyte interface, including the formation of open-porous, self-host–guest, and stratified bilayer phases as a function of the electric field at the solid–liquid interface. We also discuss the role of the perchlorate ions in the self-assembly process, whose positions could not be identified in the related experimental investigations.
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spelling pubmed-74269072020-08-14 Reliable Computational Prediction of the Supramolecular Ordering of Complex Molecules under Electrochemical Conditions Hartl, Benedikt Sharma, Shubham Brügner, Oliver Mertens, Stijn F. L. Walter, Michael Kahl, Gerhard J Chem Theory Comput [Image: see text] We propose a computationally lean, two-stage approach that reliably predicts self-assembly behavior of complex charged molecules on metallic surfaces under electrochemical conditions. Stage one uses ab initio simulations to provide reference data for the energies (evaluated for archetypical configurations) to fit the parameters of a conceptually much simpler and computationally less expensive force field of the molecules: classical, spherical particles, representing the respective atomic entities; a flat and perfectly conducting wall represents the metallic surface. Stage two feeds the energies that emerge from this force field into highly efficient and reliable optimization techniques to identify via energy minimization the ordered ground-state configurations of the molecules. We demonstrate the power of our approach by successfully reproducing, on a semiquantitative level, the intricate supramolecular ordering observed experimentally for PQP(+) and ClO(4)(–) molecules at an Au(111)–electrolyte interface, including the formation of open-porous, self-host–guest, and stratified bilayer phases as a function of the electric field at the solid–liquid interface. We also discuss the role of the perchlorate ions in the self-assembly process, whose positions could not be identified in the related experimental investigations. American Chemical Society 2020-06-15 2020-08-11 /pmc/articles/PMC7426907/ /pubmed/32536160 http://dx.doi.org/10.1021/acs.jctc.9b01251 Text en Copyright © 2020 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited.
spellingShingle Hartl, Benedikt
Sharma, Shubham
Brügner, Oliver
Mertens, Stijn F. L.
Walter, Michael
Kahl, Gerhard
Reliable Computational Prediction of the Supramolecular Ordering of Complex Molecules under Electrochemical Conditions
title Reliable Computational Prediction of the Supramolecular Ordering of Complex Molecules under Electrochemical Conditions
title_full Reliable Computational Prediction of the Supramolecular Ordering of Complex Molecules under Electrochemical Conditions
title_fullStr Reliable Computational Prediction of the Supramolecular Ordering of Complex Molecules under Electrochemical Conditions
title_full_unstemmed Reliable Computational Prediction of the Supramolecular Ordering of Complex Molecules under Electrochemical Conditions
title_short Reliable Computational Prediction of the Supramolecular Ordering of Complex Molecules under Electrochemical Conditions
title_sort reliable computational prediction of the supramolecular ordering of complex molecules under electrochemical conditions
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7426907/
https://www.ncbi.nlm.nih.gov/pubmed/32536160
http://dx.doi.org/10.1021/acs.jctc.9b01251
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