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Phase transition behaviour in yeast and bacterial populations under stress
Non-equilibrium phase transitions from survival to extinction have recently been observed in computational models of evolutionary dynamics. Dynamical signatures predictive of population collapse have been observed in yeast populations under stress. We experimentally investigate the population respon...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7428260/ https://www.ncbi.nlm.nih.gov/pubmed/32874614 http://dx.doi.org/10.1098/rsos.192211 |
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author | Ordway, Stephen W. King, Dawn M. Friend, David Noto, Christine Phu, Snowlee Huelskamp, Holly Inglis, R. Fredrik Olivas, Wendy Bahar, Sonya |
author_facet | Ordway, Stephen W. King, Dawn M. Friend, David Noto, Christine Phu, Snowlee Huelskamp, Holly Inglis, R. Fredrik Olivas, Wendy Bahar, Sonya |
author_sort | Ordway, Stephen W. |
collection | PubMed |
description | Non-equilibrium phase transitions from survival to extinction have recently been observed in computational models of evolutionary dynamics. Dynamical signatures predictive of population collapse have been observed in yeast populations under stress. We experimentally investigate the population response of the budding yeast Saccharomyces cerevisiae to biological stressors (temperature and salt concentration) in order to investigate the system's behaviour in the vicinity of population collapse. While both conditions lead to population decline, the dynamical characteristics of the population response differ significantly depending on the stressor. Under temperature stress, the population undergoes a sharp change with significant fluctuations within a critical temperature range, indicative of a continuous absorbing phase transition. In the case of salt stress, the response is more gradual. A similar range of response is observed with the application of various antibiotics to Escherichia coli, with a variety of patterns of decreased growth in response to antibiotic stress both within and across antibiotic classes and mechanisms of action. These findings have implications for the identification of critical tipping points for populations under environmental stress. |
format | Online Article Text |
id | pubmed-7428260 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-74282602020-08-31 Phase transition behaviour in yeast and bacterial populations under stress Ordway, Stephen W. King, Dawn M. Friend, David Noto, Christine Phu, Snowlee Huelskamp, Holly Inglis, R. Fredrik Olivas, Wendy Bahar, Sonya R Soc Open Sci Physics and Biophysics Non-equilibrium phase transitions from survival to extinction have recently been observed in computational models of evolutionary dynamics. Dynamical signatures predictive of population collapse have been observed in yeast populations under stress. We experimentally investigate the population response of the budding yeast Saccharomyces cerevisiae to biological stressors (temperature and salt concentration) in order to investigate the system's behaviour in the vicinity of population collapse. While both conditions lead to population decline, the dynamical characteristics of the population response differ significantly depending on the stressor. Under temperature stress, the population undergoes a sharp change with significant fluctuations within a critical temperature range, indicative of a continuous absorbing phase transition. In the case of salt stress, the response is more gradual. A similar range of response is observed with the application of various antibiotics to Escherichia coli, with a variety of patterns of decreased growth in response to antibiotic stress both within and across antibiotic classes and mechanisms of action. These findings have implications for the identification of critical tipping points for populations under environmental stress. The Royal Society 2020-07-22 /pmc/articles/PMC7428260/ /pubmed/32874614 http://dx.doi.org/10.1098/rsos.192211 Text en © 2020 The Authors. http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Physics and Biophysics Ordway, Stephen W. King, Dawn M. Friend, David Noto, Christine Phu, Snowlee Huelskamp, Holly Inglis, R. Fredrik Olivas, Wendy Bahar, Sonya Phase transition behaviour in yeast and bacterial populations under stress |
title | Phase transition behaviour in yeast and bacterial populations under stress |
title_full | Phase transition behaviour in yeast and bacterial populations under stress |
title_fullStr | Phase transition behaviour in yeast and bacterial populations under stress |
title_full_unstemmed | Phase transition behaviour in yeast and bacterial populations under stress |
title_short | Phase transition behaviour in yeast and bacterial populations under stress |
title_sort | phase transition behaviour in yeast and bacterial populations under stress |
topic | Physics and Biophysics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7428260/ https://www.ncbi.nlm.nih.gov/pubmed/32874614 http://dx.doi.org/10.1098/rsos.192211 |
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