Cargando…

Phase transition behaviour in yeast and bacterial populations under stress

Non-equilibrium phase transitions from survival to extinction have recently been observed in computational models of evolutionary dynamics. Dynamical signatures predictive of population collapse have been observed in yeast populations under stress. We experimentally investigate the population respon...

Descripción completa

Detalles Bibliográficos
Autores principales: Ordway, Stephen W., King, Dawn M., Friend, David, Noto, Christine, Phu, Snowlee, Huelskamp, Holly, Inglis, R. Fredrik, Olivas, Wendy, Bahar, Sonya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7428260/
https://www.ncbi.nlm.nih.gov/pubmed/32874614
http://dx.doi.org/10.1098/rsos.192211
_version_ 1783571036053176320
author Ordway, Stephen W.
King, Dawn M.
Friend, David
Noto, Christine
Phu, Snowlee
Huelskamp, Holly
Inglis, R. Fredrik
Olivas, Wendy
Bahar, Sonya
author_facet Ordway, Stephen W.
King, Dawn M.
Friend, David
Noto, Christine
Phu, Snowlee
Huelskamp, Holly
Inglis, R. Fredrik
Olivas, Wendy
Bahar, Sonya
author_sort Ordway, Stephen W.
collection PubMed
description Non-equilibrium phase transitions from survival to extinction have recently been observed in computational models of evolutionary dynamics. Dynamical signatures predictive of population collapse have been observed in yeast populations under stress. We experimentally investigate the population response of the budding yeast Saccharomyces cerevisiae to biological stressors (temperature and salt concentration) in order to investigate the system's behaviour in the vicinity of population collapse. While both conditions lead to population decline, the dynamical characteristics of the population response differ significantly depending on the stressor. Under temperature stress, the population undergoes a sharp change with significant fluctuations within a critical temperature range, indicative of a continuous absorbing phase transition. In the case of salt stress, the response is more gradual. A similar range of response is observed with the application of various antibiotics to Escherichia coli, with a variety of patterns of decreased growth in response to antibiotic stress both within and across antibiotic classes and mechanisms of action. These findings have implications for the identification of critical tipping points for populations under environmental stress.
format Online
Article
Text
id pubmed-7428260
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher The Royal Society
record_format MEDLINE/PubMed
spelling pubmed-74282602020-08-31 Phase transition behaviour in yeast and bacterial populations under stress Ordway, Stephen W. King, Dawn M. Friend, David Noto, Christine Phu, Snowlee Huelskamp, Holly Inglis, R. Fredrik Olivas, Wendy Bahar, Sonya R Soc Open Sci Physics and Biophysics Non-equilibrium phase transitions from survival to extinction have recently been observed in computational models of evolutionary dynamics. Dynamical signatures predictive of population collapse have been observed in yeast populations under stress. We experimentally investigate the population response of the budding yeast Saccharomyces cerevisiae to biological stressors (temperature and salt concentration) in order to investigate the system's behaviour in the vicinity of population collapse. While both conditions lead to population decline, the dynamical characteristics of the population response differ significantly depending on the stressor. Under temperature stress, the population undergoes a sharp change with significant fluctuations within a critical temperature range, indicative of a continuous absorbing phase transition. In the case of salt stress, the response is more gradual. A similar range of response is observed with the application of various antibiotics to Escherichia coli, with a variety of patterns of decreased growth in response to antibiotic stress both within and across antibiotic classes and mechanisms of action. These findings have implications for the identification of critical tipping points for populations under environmental stress. The Royal Society 2020-07-22 /pmc/articles/PMC7428260/ /pubmed/32874614 http://dx.doi.org/10.1098/rsos.192211 Text en © 2020 The Authors. http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.
spellingShingle Physics and Biophysics
Ordway, Stephen W.
King, Dawn M.
Friend, David
Noto, Christine
Phu, Snowlee
Huelskamp, Holly
Inglis, R. Fredrik
Olivas, Wendy
Bahar, Sonya
Phase transition behaviour in yeast and bacterial populations under stress
title Phase transition behaviour in yeast and bacterial populations under stress
title_full Phase transition behaviour in yeast and bacterial populations under stress
title_fullStr Phase transition behaviour in yeast and bacterial populations under stress
title_full_unstemmed Phase transition behaviour in yeast and bacterial populations under stress
title_short Phase transition behaviour in yeast and bacterial populations under stress
title_sort phase transition behaviour in yeast and bacterial populations under stress
topic Physics and Biophysics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7428260/
https://www.ncbi.nlm.nih.gov/pubmed/32874614
http://dx.doi.org/10.1098/rsos.192211
work_keys_str_mv AT ordwaystephenw phasetransitionbehaviourinyeastandbacterialpopulationsunderstress
AT kingdawnm phasetransitionbehaviourinyeastandbacterialpopulationsunderstress
AT frienddavid phasetransitionbehaviourinyeastandbacterialpopulationsunderstress
AT notochristine phasetransitionbehaviourinyeastandbacterialpopulationsunderstress
AT phusnowlee phasetransitionbehaviourinyeastandbacterialpopulationsunderstress
AT huelskampholly phasetransitionbehaviourinyeastandbacterialpopulationsunderstress
AT inglisrfredrik phasetransitionbehaviourinyeastandbacterialpopulationsunderstress
AT olivaswendy phasetransitionbehaviourinyeastandbacterialpopulationsunderstress
AT baharsonya phasetransitionbehaviourinyeastandbacterialpopulationsunderstress