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Comparison of International Classification of Diseases and Related Health Problems, Tenth Revision Codes With Electronic Medical Records Among Patients With Symptoms of Coronavirus Disease 2019

IMPORTANCE: International Statistical Classification of Diseases and Related Health Problems, Tenth Revision (ICD-10) codes are used to characterize coronavirus disease 2019 (COVID-19)–related symptoms. Their accuracy is unknown, which could affect downstream analyses. OBJECTIVE: To compare the perf...

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Autores principales: Crabb, Brendan T., Lyons, Ann, Bale, Margaret, Martin, Valerie, Berger, Ben, Mann, Sara, West, William B., Brown, Alyssa, Peacock, Jordan B., Leung, Daniel T., Shah, Rashmee U.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Medical Association 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7428802/
https://www.ncbi.nlm.nih.gov/pubmed/32797176
http://dx.doi.org/10.1001/jamanetworkopen.2020.17703
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author Crabb, Brendan T.
Lyons, Ann
Bale, Margaret
Martin, Valerie
Berger, Ben
Mann, Sara
West, William B.
Brown, Alyssa
Peacock, Jordan B.
Leung, Daniel T.
Shah, Rashmee U.
author_facet Crabb, Brendan T.
Lyons, Ann
Bale, Margaret
Martin, Valerie
Berger, Ben
Mann, Sara
West, William B.
Brown, Alyssa
Peacock, Jordan B.
Leung, Daniel T.
Shah, Rashmee U.
author_sort Crabb, Brendan T.
collection PubMed
description IMPORTANCE: International Statistical Classification of Diseases and Related Health Problems, Tenth Revision (ICD-10) codes are used to characterize coronavirus disease 2019 (COVID-19)–related symptoms. Their accuracy is unknown, which could affect downstream analyses. OBJECTIVE: To compare the performance of fever-, cough-, and dyspnea-specific ICD-10 codes with medical record review among patients tested for COVID-19. DESIGN, SETTING, AND PARTICIPANTS: This cohort study included patients who underwent quantitative reverse transcriptase–polymerase chain reaction testing for severe acute respiratory syndrome coronavirus 2 at University of Utah Health from March 10 to April 6, 2020. Data analysis was performed in April 2020. MAIN OUTCOMES AND MEASURES: The sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV) of ICD-10 codes for fever (R50*), cough (R05*), and dyspnea (R06.0*) were compared with manual medical record review. Performance was calculated overall and stratified by COVID-19 test result, sex, age group (<50, 50-64, and >64 years), and inpatient status. Bootstrapping was used to generate 95% CIs, and Pearson χ(2) tests were used to compare different subgroups. RESULTS: Among 2201 patients tested for COVD-19, the mean (SD) age was 42 (17) years; 1201 (55%) were female, 1569 (71%) were White, and 282 (13%) were Hispanic or Latino. The prevalence of fever was 66% (1444 patients), that of cough was 88% (1930 patients), and that of dyspnea was 64% (1399 patients). For fever, the sensitivity of ICD-10 codes was 0.26 (95% CI, 0.24-0.29), specificity was 0.98 (95% CI, 0.96-0.99), PPV was 0.96 (95% CI, 0.93-0.97), and NPV was 0.41 (95% CI, 0.39-0.43). For cough, the sensitivity of ICD-10 codes was 0.44 (95% CI, 0.42-0.46), specificity was 0.88 (95% CI, 0.84-0.92), PPV was 0.96 (95% CI, 0.95-0.97), and NPV was 0.18 (95% CI, 0.16-0.20). For dyspnea, the sensitivity of ICD-10 codes was 0.24 (95% CI, 0.22-0.26), specificity was 0.97 (95% CI, 0.96-0.98), PPV was 0.93 (95% CI, 0.90-0.96), and NPV was 0.42 (95% CI, 0.40-0.44). ICD-10 code performance was better for inpatients than for outpatients for fever (χ(2) = 41.30; P < .001) and dyspnea (χ(2) = 14.25; P = .003) but not for cough (χ(2) = 5.13; P = .16). CONCLUSIONS AND RELEVANCE: These findings suggest that ICD-10 codes lack sensitivity and have poor NPV for symptoms associated with COVID-19. This inaccuracy has implications for any downstream data model, scientific discovery, or surveillance that relies on these codes.
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spelling pubmed-74288022020-08-20 Comparison of International Classification of Diseases and Related Health Problems, Tenth Revision Codes With Electronic Medical Records Among Patients With Symptoms of Coronavirus Disease 2019 Crabb, Brendan T. Lyons, Ann Bale, Margaret Martin, Valerie Berger, Ben Mann, Sara West, William B. Brown, Alyssa Peacock, Jordan B. Leung, Daniel T. Shah, Rashmee U. JAMA Netw Open Original Investigation IMPORTANCE: International Statistical Classification of Diseases and Related Health Problems, Tenth Revision (ICD-10) codes are used to characterize coronavirus disease 2019 (COVID-19)–related symptoms. Their accuracy is unknown, which could affect downstream analyses. OBJECTIVE: To compare the performance of fever-, cough-, and dyspnea-specific ICD-10 codes with medical record review among patients tested for COVID-19. DESIGN, SETTING, AND PARTICIPANTS: This cohort study included patients who underwent quantitative reverse transcriptase–polymerase chain reaction testing for severe acute respiratory syndrome coronavirus 2 at University of Utah Health from March 10 to April 6, 2020. Data analysis was performed in April 2020. MAIN OUTCOMES AND MEASURES: The sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV) of ICD-10 codes for fever (R50*), cough (R05*), and dyspnea (R06.0*) were compared with manual medical record review. Performance was calculated overall and stratified by COVID-19 test result, sex, age group (<50, 50-64, and >64 years), and inpatient status. Bootstrapping was used to generate 95% CIs, and Pearson χ(2) tests were used to compare different subgroups. RESULTS: Among 2201 patients tested for COVD-19, the mean (SD) age was 42 (17) years; 1201 (55%) were female, 1569 (71%) were White, and 282 (13%) were Hispanic or Latino. The prevalence of fever was 66% (1444 patients), that of cough was 88% (1930 patients), and that of dyspnea was 64% (1399 patients). For fever, the sensitivity of ICD-10 codes was 0.26 (95% CI, 0.24-0.29), specificity was 0.98 (95% CI, 0.96-0.99), PPV was 0.96 (95% CI, 0.93-0.97), and NPV was 0.41 (95% CI, 0.39-0.43). For cough, the sensitivity of ICD-10 codes was 0.44 (95% CI, 0.42-0.46), specificity was 0.88 (95% CI, 0.84-0.92), PPV was 0.96 (95% CI, 0.95-0.97), and NPV was 0.18 (95% CI, 0.16-0.20). For dyspnea, the sensitivity of ICD-10 codes was 0.24 (95% CI, 0.22-0.26), specificity was 0.97 (95% CI, 0.96-0.98), PPV was 0.93 (95% CI, 0.90-0.96), and NPV was 0.42 (95% CI, 0.40-0.44). ICD-10 code performance was better for inpatients than for outpatients for fever (χ(2) = 41.30; P < .001) and dyspnea (χ(2) = 14.25; P = .003) but not for cough (χ(2) = 5.13; P = .16). CONCLUSIONS AND RELEVANCE: These findings suggest that ICD-10 codes lack sensitivity and have poor NPV for symptoms associated with COVID-19. This inaccuracy has implications for any downstream data model, scientific discovery, or surveillance that relies on these codes. American Medical Association 2020-08-14 /pmc/articles/PMC7428802/ /pubmed/32797176 http://dx.doi.org/10.1001/jamanetworkopen.2020.17703 Text en Copyright 2020 Crabb BT et al. JAMA Network Open. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the CC-BY License.
spellingShingle Original Investigation
Crabb, Brendan T.
Lyons, Ann
Bale, Margaret
Martin, Valerie
Berger, Ben
Mann, Sara
West, William B.
Brown, Alyssa
Peacock, Jordan B.
Leung, Daniel T.
Shah, Rashmee U.
Comparison of International Classification of Diseases and Related Health Problems, Tenth Revision Codes With Electronic Medical Records Among Patients With Symptoms of Coronavirus Disease 2019
title Comparison of International Classification of Diseases and Related Health Problems, Tenth Revision Codes With Electronic Medical Records Among Patients With Symptoms of Coronavirus Disease 2019
title_full Comparison of International Classification of Diseases and Related Health Problems, Tenth Revision Codes With Electronic Medical Records Among Patients With Symptoms of Coronavirus Disease 2019
title_fullStr Comparison of International Classification of Diseases and Related Health Problems, Tenth Revision Codes With Electronic Medical Records Among Patients With Symptoms of Coronavirus Disease 2019
title_full_unstemmed Comparison of International Classification of Diseases and Related Health Problems, Tenth Revision Codes With Electronic Medical Records Among Patients With Symptoms of Coronavirus Disease 2019
title_short Comparison of International Classification of Diseases and Related Health Problems, Tenth Revision Codes With Electronic Medical Records Among Patients With Symptoms of Coronavirus Disease 2019
title_sort comparison of international classification of diseases and related health problems, tenth revision codes with electronic medical records among patients with symptoms of coronavirus disease 2019
topic Original Investigation
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7428802/
https://www.ncbi.nlm.nih.gov/pubmed/32797176
http://dx.doi.org/10.1001/jamanetworkopen.2020.17703
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