Cargando…
Social Group Optimization–Assisted Kapur’s Entropy and Morphological Segmentation for Automated Detection of COVID-19 Infection from Computed Tomography Images
The coronavirus disease (COVID-19) caused by a novel coronavirus, SARS-CoV-2, has been declared a global pandemic. Due to its infection rate and severity, it has emerged as one of the major global threats of the current generation. To support the current combat against the disease, this research aim...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7429098/ https://www.ncbi.nlm.nih.gov/pubmed/32837591 http://dx.doi.org/10.1007/s12559-020-09751-3 |
_version_ | 1783571221824143360 |
---|---|
author | Dey, Nilanjan Rajinikanth, V. Fong, Simon James Kaiser, M. Shamim Mahmud, Mufti |
author_facet | Dey, Nilanjan Rajinikanth, V. Fong, Simon James Kaiser, M. Shamim Mahmud, Mufti |
author_sort | Dey, Nilanjan |
collection | PubMed |
description | The coronavirus disease (COVID-19) caused by a novel coronavirus, SARS-CoV-2, has been declared a global pandemic. Due to its infection rate and severity, it has emerged as one of the major global threats of the current generation. To support the current combat against the disease, this research aims to propose a machine learning–based pipeline to detect COVID-19 infection using lung computed tomography scan images (CTI). This implemented pipeline consists of a number of sub-procedures ranging from segmenting the COVID-19 infection to classifying the segmented regions. The initial part of the pipeline implements the segmentation of the COVID-19–affected CTI using social group optimization–based Kapur’s entropy thresholding, followed by k-means clustering and morphology-based segmentation. The next part of the pipeline implements feature extraction, selection, and fusion to classify the infection. Principle component analysis–based serial fusion technique is used in fusing the features and the fused feature vector is then employed to train, test, and validate four different classifiers namely Random Forest, K-Nearest Neighbors (KNN), Support Vector Machine with Radial Basis Function, and Decision Tree. Experimental results using benchmark datasets show a high accuracy (> 91%) for the morphology-based segmentation task; for the classification task, the KNN offers the highest accuracy among the compared classifiers (> 87%). However, this should be noted that this method still awaits clinical validation, and therefore should not be used to clinically diagnose ongoing COVID-19 infection. |
format | Online Article Text |
id | pubmed-7429098 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-74290982020-08-17 Social Group Optimization–Assisted Kapur’s Entropy and Morphological Segmentation for Automated Detection of COVID-19 Infection from Computed Tomography Images Dey, Nilanjan Rajinikanth, V. Fong, Simon James Kaiser, M. Shamim Mahmud, Mufti Cognit Comput Article The coronavirus disease (COVID-19) caused by a novel coronavirus, SARS-CoV-2, has been declared a global pandemic. Due to its infection rate and severity, it has emerged as one of the major global threats of the current generation. To support the current combat against the disease, this research aims to propose a machine learning–based pipeline to detect COVID-19 infection using lung computed tomography scan images (CTI). This implemented pipeline consists of a number of sub-procedures ranging from segmenting the COVID-19 infection to classifying the segmented regions. The initial part of the pipeline implements the segmentation of the COVID-19–affected CTI using social group optimization–based Kapur’s entropy thresholding, followed by k-means clustering and morphology-based segmentation. The next part of the pipeline implements feature extraction, selection, and fusion to classify the infection. Principle component analysis–based serial fusion technique is used in fusing the features and the fused feature vector is then employed to train, test, and validate four different classifiers namely Random Forest, K-Nearest Neighbors (KNN), Support Vector Machine with Radial Basis Function, and Decision Tree. Experimental results using benchmark datasets show a high accuracy (> 91%) for the morphology-based segmentation task; for the classification task, the KNN offers the highest accuracy among the compared classifiers (> 87%). However, this should be noted that this method still awaits clinical validation, and therefore should not be used to clinically diagnose ongoing COVID-19 infection. Springer US 2020-08-15 2020 /pmc/articles/PMC7429098/ /pubmed/32837591 http://dx.doi.org/10.1007/s12559-020-09751-3 Text en © The Author(s) 2020 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Dey, Nilanjan Rajinikanth, V. Fong, Simon James Kaiser, M. Shamim Mahmud, Mufti Social Group Optimization–Assisted Kapur’s Entropy and Morphological Segmentation for Automated Detection of COVID-19 Infection from Computed Tomography Images |
title | Social Group Optimization–Assisted Kapur’s Entropy and Morphological Segmentation for Automated Detection of COVID-19 Infection from Computed Tomography Images |
title_full | Social Group Optimization–Assisted Kapur’s Entropy and Morphological Segmentation for Automated Detection of COVID-19 Infection from Computed Tomography Images |
title_fullStr | Social Group Optimization–Assisted Kapur’s Entropy and Morphological Segmentation for Automated Detection of COVID-19 Infection from Computed Tomography Images |
title_full_unstemmed | Social Group Optimization–Assisted Kapur’s Entropy and Morphological Segmentation for Automated Detection of COVID-19 Infection from Computed Tomography Images |
title_short | Social Group Optimization–Assisted Kapur’s Entropy and Morphological Segmentation for Automated Detection of COVID-19 Infection from Computed Tomography Images |
title_sort | social group optimization–assisted kapur’s entropy and morphological segmentation for automated detection of covid-19 infection from computed tomography images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7429098/ https://www.ncbi.nlm.nih.gov/pubmed/32837591 http://dx.doi.org/10.1007/s12559-020-09751-3 |
work_keys_str_mv | AT deynilanjan socialgroupoptimizationassistedkapursentropyandmorphologicalsegmentationforautomateddetectionofcovid19infectionfromcomputedtomographyimages AT rajinikanthv socialgroupoptimizationassistedkapursentropyandmorphologicalsegmentationforautomateddetectionofcovid19infectionfromcomputedtomographyimages AT fongsimonjames socialgroupoptimizationassistedkapursentropyandmorphologicalsegmentationforautomateddetectionofcovid19infectionfromcomputedtomographyimages AT kaisermshamim socialgroupoptimizationassistedkapursentropyandmorphologicalsegmentationforautomateddetectionofcovid19infectionfromcomputedtomographyimages AT mahmudmufti socialgroupoptimizationassistedkapursentropyandmorphologicalsegmentationforautomateddetectionofcovid19infectionfromcomputedtomographyimages |