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Identifying epidemic spreading dynamics of COVID-19 by pseudocoevolutionary simulated annealing optimizers

At the end of 2019, a new coronavirus (COVID-19) epidemic has triggered global public health concern. Here, a model integrating the daily intercity migration network, which constructed from real-world migration records and the Susceptible–Exposed–Infected–Removed model, is utilized to predict the ep...

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Autores principales: Zhan, Choujun, Zheng, Yufan, Lai, Zhikang, Hao, Tianyong, Li, Bing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer London 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7429370/
https://www.ncbi.nlm.nih.gov/pubmed/32836902
http://dx.doi.org/10.1007/s00521-020-05285-9
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author Zhan, Choujun
Zheng, Yufan
Lai, Zhikang
Hao, Tianyong
Li, Bing
author_facet Zhan, Choujun
Zheng, Yufan
Lai, Zhikang
Hao, Tianyong
Li, Bing
author_sort Zhan, Choujun
collection PubMed
description At the end of 2019, a new coronavirus (COVID-19) epidemic has triggered global public health concern. Here, a model integrating the daily intercity migration network, which constructed from real-world migration records and the Susceptible–Exposed–Infected–Removed model, is utilized to predict the epidemic spreading of the COVID-19 in more than 300 cities in China. However, the model has more than 1800 unknown parameters, which is a challenging task to estimate all unknown parameters from historical data within a reasonable computation time. In this article, we proposed a pseudocoevolutionary simulated annealing (SA) algorithm for identifying these unknown parameters. The large volume of unknown parameters of this model is optimized through three procedures co-adapted SA-based optimization processes, respectively. Our results confirm that the proposed method is both efficient and robust. Then, we use the identified model to predict the trends of the epidemic spreading of the COVID-19 in these cities. We find that the number of infections in most cities in China has reached their peak from February 29, 2020, to March 15, 2020. For most cities outside Hubei province, the total number of infected individuals would be less than 100, while for most cities in Hubei province (exclude Wuhan), the total number of infected individuals would be less than 3000.
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spelling pubmed-74293702020-08-17 Identifying epidemic spreading dynamics of COVID-19 by pseudocoevolutionary simulated annealing optimizers Zhan, Choujun Zheng, Yufan Lai, Zhikang Hao, Tianyong Li, Bing Neural Comput Appl Original Article At the end of 2019, a new coronavirus (COVID-19) epidemic has triggered global public health concern. Here, a model integrating the daily intercity migration network, which constructed from real-world migration records and the Susceptible–Exposed–Infected–Removed model, is utilized to predict the epidemic spreading of the COVID-19 in more than 300 cities in China. However, the model has more than 1800 unknown parameters, which is a challenging task to estimate all unknown parameters from historical data within a reasonable computation time. In this article, we proposed a pseudocoevolutionary simulated annealing (SA) algorithm for identifying these unknown parameters. The large volume of unknown parameters of this model is optimized through three procedures co-adapted SA-based optimization processes, respectively. Our results confirm that the proposed method is both efficient and robust. Then, we use the identified model to predict the trends of the epidemic spreading of the COVID-19 in these cities. We find that the number of infections in most cities in China has reached their peak from February 29, 2020, to March 15, 2020. For most cities outside Hubei province, the total number of infected individuals would be less than 100, while for most cities in Hubei province (exclude Wuhan), the total number of infected individuals would be less than 3000. Springer London 2020-08-17 2021 /pmc/articles/PMC7429370/ /pubmed/32836902 http://dx.doi.org/10.1007/s00521-020-05285-9 Text en © Springer-Verlag London Ltd., part of Springer Nature 2020 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Article
Zhan, Choujun
Zheng, Yufan
Lai, Zhikang
Hao, Tianyong
Li, Bing
Identifying epidemic spreading dynamics of COVID-19 by pseudocoevolutionary simulated annealing optimizers
title Identifying epidemic spreading dynamics of COVID-19 by pseudocoevolutionary simulated annealing optimizers
title_full Identifying epidemic spreading dynamics of COVID-19 by pseudocoevolutionary simulated annealing optimizers
title_fullStr Identifying epidemic spreading dynamics of COVID-19 by pseudocoevolutionary simulated annealing optimizers
title_full_unstemmed Identifying epidemic spreading dynamics of COVID-19 by pseudocoevolutionary simulated annealing optimizers
title_short Identifying epidemic spreading dynamics of COVID-19 by pseudocoevolutionary simulated annealing optimizers
title_sort identifying epidemic spreading dynamics of covid-19 by pseudocoevolutionary simulated annealing optimizers
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7429370/
https://www.ncbi.nlm.nih.gov/pubmed/32836902
http://dx.doi.org/10.1007/s00521-020-05285-9
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