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Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera

The global COVID-19 pandemic has mobilized efforts to develop vaccines and antibody-based therapeutics, including convalescent plasma therapy, that inhibit viral entry by inducing or transferring neutralizing antibodies (nAbs) against the SARS-CoV-2 spike glycoprotein (CoV2-S). However, rigorous eff...

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Autores principales: Oguntuyo, Kasopefoluwa Y., Stevens, Christian S., Hung, Chuan-Tien, Ikegame, Satoshi, Acklin, Joshua A., Kowdle, Shreyas S., Carmichael, Jillian C., Chiu, Hsin-Ping, Azarm, Kristopher D., Haas, Griffin D., Amanat, Fatima, Klingler, Jéromine, Baine, Ian, Arinsburg, Suzanne, Bandres, Juan C., Siddiquey, Mohammed N.A., Schilke, Robert M., Woolard, Matthew D., Zhang, Hongbo, Duty, Andrew J., Kraus, Thomas A., Moran, Thomas M., Tortorella, Domenico, Lim, Jean K., Gamarnik, Andrea V., Hioe, Catarina E., Zolla-Pazner, Susan, Ivanov, Stanimir S., Kamil, Jeremy P., Krammer, Florian, Lee, Benhur
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7430605/
https://www.ncbi.nlm.nih.gov/pubmed/32817961
http://dx.doi.org/10.1101/2020.08.13.20157222
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author Oguntuyo, Kasopefoluwa Y.
Stevens, Christian S.
Hung, Chuan-Tien
Ikegame, Satoshi
Acklin, Joshua A.
Kowdle, Shreyas S.
Carmichael, Jillian C.
Chiu, Hsin-Ping
Azarm, Kristopher D.
Haas, Griffin D.
Amanat, Fatima
Klingler, Jéromine
Baine, Ian
Arinsburg, Suzanne
Bandres, Juan C.
Siddiquey, Mohammed N.A.
Schilke, Robert M.
Woolard, Matthew D.
Zhang, Hongbo
Duty, Andrew J.
Kraus, Thomas A.
Moran, Thomas M.
Tortorella, Domenico
Lim, Jean K.
Gamarnik, Andrea V.
Hioe, Catarina E.
Zolla-Pazner, Susan
Ivanov, Stanimir S.
Kamil, Jeremy P.
Krammer, Florian
Lee, Benhur
author_facet Oguntuyo, Kasopefoluwa Y.
Stevens, Christian S.
Hung, Chuan-Tien
Ikegame, Satoshi
Acklin, Joshua A.
Kowdle, Shreyas S.
Carmichael, Jillian C.
Chiu, Hsin-Ping
Azarm, Kristopher D.
Haas, Griffin D.
Amanat, Fatima
Klingler, Jéromine
Baine, Ian
Arinsburg, Suzanne
Bandres, Juan C.
Siddiquey, Mohammed N.A.
Schilke, Robert M.
Woolard, Matthew D.
Zhang, Hongbo
Duty, Andrew J.
Kraus, Thomas A.
Moran, Thomas M.
Tortorella, Domenico
Lim, Jean K.
Gamarnik, Andrea V.
Hioe, Catarina E.
Zolla-Pazner, Susan
Ivanov, Stanimir S.
Kamil, Jeremy P.
Krammer, Florian
Lee, Benhur
author_sort Oguntuyo, Kasopefoluwa Y.
collection PubMed
description The global COVID-19 pandemic has mobilized efforts to develop vaccines and antibody-based therapeutics, including convalescent plasma therapy, that inhibit viral entry by inducing or transferring neutralizing antibodies (nAbs) against the SARS-CoV-2 spike glycoprotein (CoV2-S). However, rigorous efficacy testing requires extensive screening with live virus under onerous BSL3 conditions which limits high throughput screening of patient and vaccine sera. Myriad BSL-2 compatible surrogate virus neutralization assays (VNAs) have been developed to overcome this barrier. Yet, there is marked variability between VNAs and how their results are presented, making inter-group comparisons difficult. To address these limitations, we developed a standardized VNA using VSVΔG-based CoV-2-S pseudotyped particles (CoV2pp) that can be robustly produced at scale and generate accurate neutralizing titers within 18 hours post-infection. Our standardized CoV2pp VNA showed a strong positive correlation with CoV2-S ELISA and live virus neutralizations in confirmed convalescent patient sera. Three independent groups subsequently validated our standardized CoV2pp VNA (n>120). Our data show that absolute (abs) IC50, IC80, and IC90 values can be legitimately compared across diverse cohorts, highlight the substantial but consistent variability in neutralization potency across these cohorts, and support the use of absIC80 as a more meaningful metric for assessing the neutralization potency of vaccine or convalescent sera. Lastly, we used our CoV2pp in a screen to identify ultra-permissive 293T clones that stably express ACE2 or ACE2+TMPRSS2. When used in combination with our CoV2pp, we can now produce CoV2pp sufficient for 150,000 standardized VNA/week.
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spelling pubmed-74306052020-08-18 Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera Oguntuyo, Kasopefoluwa Y. Stevens, Christian S. Hung, Chuan-Tien Ikegame, Satoshi Acklin, Joshua A. Kowdle, Shreyas S. Carmichael, Jillian C. Chiu, Hsin-Ping Azarm, Kristopher D. Haas, Griffin D. Amanat, Fatima Klingler, Jéromine Baine, Ian Arinsburg, Suzanne Bandres, Juan C. Siddiquey, Mohammed N.A. Schilke, Robert M. Woolard, Matthew D. Zhang, Hongbo Duty, Andrew J. Kraus, Thomas A. Moran, Thomas M. Tortorella, Domenico Lim, Jean K. Gamarnik, Andrea V. Hioe, Catarina E. Zolla-Pazner, Susan Ivanov, Stanimir S. Kamil, Jeremy P. Krammer, Florian Lee, Benhur medRxiv Article The global COVID-19 pandemic has mobilized efforts to develop vaccines and antibody-based therapeutics, including convalescent plasma therapy, that inhibit viral entry by inducing or transferring neutralizing antibodies (nAbs) against the SARS-CoV-2 spike glycoprotein (CoV2-S). However, rigorous efficacy testing requires extensive screening with live virus under onerous BSL3 conditions which limits high throughput screening of patient and vaccine sera. Myriad BSL-2 compatible surrogate virus neutralization assays (VNAs) have been developed to overcome this barrier. Yet, there is marked variability between VNAs and how their results are presented, making inter-group comparisons difficult. To address these limitations, we developed a standardized VNA using VSVΔG-based CoV-2-S pseudotyped particles (CoV2pp) that can be robustly produced at scale and generate accurate neutralizing titers within 18 hours post-infection. Our standardized CoV2pp VNA showed a strong positive correlation with CoV2-S ELISA and live virus neutralizations in confirmed convalescent patient sera. Three independent groups subsequently validated our standardized CoV2pp VNA (n>120). Our data show that absolute (abs) IC50, IC80, and IC90 values can be legitimately compared across diverse cohorts, highlight the substantial but consistent variability in neutralization potency across these cohorts, and support the use of absIC80 as a more meaningful metric for assessing the neutralization potency of vaccine or convalescent sera. Lastly, we used our CoV2pp in a screen to identify ultra-permissive 293T clones that stably express ACE2 or ACE2+TMPRSS2. When used in combination with our CoV2pp, we can now produce CoV2pp sufficient for 150,000 standardized VNA/week. Cold Spring Harbor Laboratory 2020-08-27 /pmc/articles/PMC7430605/ /pubmed/32817961 http://dx.doi.org/10.1101/2020.08.13.20157222 Text en http://creativecommons.org/licenses/by-nc/4.0/It is made available under a CC-BY-NC 4.0 International license (http://creativecommons.org/licenses/by-nc/4.0/) .
spellingShingle Article
Oguntuyo, Kasopefoluwa Y.
Stevens, Christian S.
Hung, Chuan-Tien
Ikegame, Satoshi
Acklin, Joshua A.
Kowdle, Shreyas S.
Carmichael, Jillian C.
Chiu, Hsin-Ping
Azarm, Kristopher D.
Haas, Griffin D.
Amanat, Fatima
Klingler, Jéromine
Baine, Ian
Arinsburg, Suzanne
Bandres, Juan C.
Siddiquey, Mohammed N.A.
Schilke, Robert M.
Woolard, Matthew D.
Zhang, Hongbo
Duty, Andrew J.
Kraus, Thomas A.
Moran, Thomas M.
Tortorella, Domenico
Lim, Jean K.
Gamarnik, Andrea V.
Hioe, Catarina E.
Zolla-Pazner, Susan
Ivanov, Stanimir S.
Kamil, Jeremy P.
Krammer, Florian
Lee, Benhur
Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera
title Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera
title_full Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera
title_fullStr Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera
title_full_unstemmed Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera
title_short Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera
title_sort quantifying absolute neutralization titers against sars-cov-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of covid-19 sera
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7430605/
https://www.ncbi.nlm.nih.gov/pubmed/32817961
http://dx.doi.org/10.1101/2020.08.13.20157222
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