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Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera
The global COVID-19 pandemic has mobilized efforts to develop vaccines and antibody-based therapeutics, including convalescent plasma therapy, that inhibit viral entry by inducing or transferring neutralizing antibodies (nAbs) against the SARS-CoV-2 spike glycoprotein (CoV2-S). However, rigorous eff...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7430605/ https://www.ncbi.nlm.nih.gov/pubmed/32817961 http://dx.doi.org/10.1101/2020.08.13.20157222 |
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author | Oguntuyo, Kasopefoluwa Y. Stevens, Christian S. Hung, Chuan-Tien Ikegame, Satoshi Acklin, Joshua A. Kowdle, Shreyas S. Carmichael, Jillian C. Chiu, Hsin-Ping Azarm, Kristopher D. Haas, Griffin D. Amanat, Fatima Klingler, Jéromine Baine, Ian Arinsburg, Suzanne Bandres, Juan C. Siddiquey, Mohammed N.A. Schilke, Robert M. Woolard, Matthew D. Zhang, Hongbo Duty, Andrew J. Kraus, Thomas A. Moran, Thomas M. Tortorella, Domenico Lim, Jean K. Gamarnik, Andrea V. Hioe, Catarina E. Zolla-Pazner, Susan Ivanov, Stanimir S. Kamil, Jeremy P. Krammer, Florian Lee, Benhur |
author_facet | Oguntuyo, Kasopefoluwa Y. Stevens, Christian S. Hung, Chuan-Tien Ikegame, Satoshi Acklin, Joshua A. Kowdle, Shreyas S. Carmichael, Jillian C. Chiu, Hsin-Ping Azarm, Kristopher D. Haas, Griffin D. Amanat, Fatima Klingler, Jéromine Baine, Ian Arinsburg, Suzanne Bandres, Juan C. Siddiquey, Mohammed N.A. Schilke, Robert M. Woolard, Matthew D. Zhang, Hongbo Duty, Andrew J. Kraus, Thomas A. Moran, Thomas M. Tortorella, Domenico Lim, Jean K. Gamarnik, Andrea V. Hioe, Catarina E. Zolla-Pazner, Susan Ivanov, Stanimir S. Kamil, Jeremy P. Krammer, Florian Lee, Benhur |
author_sort | Oguntuyo, Kasopefoluwa Y. |
collection | PubMed |
description | The global COVID-19 pandemic has mobilized efforts to develop vaccines and antibody-based therapeutics, including convalescent plasma therapy, that inhibit viral entry by inducing or transferring neutralizing antibodies (nAbs) against the SARS-CoV-2 spike glycoprotein (CoV2-S). However, rigorous efficacy testing requires extensive screening with live virus under onerous BSL3 conditions which limits high throughput screening of patient and vaccine sera. Myriad BSL-2 compatible surrogate virus neutralization assays (VNAs) have been developed to overcome this barrier. Yet, there is marked variability between VNAs and how their results are presented, making inter-group comparisons difficult. To address these limitations, we developed a standardized VNA using VSVΔG-based CoV-2-S pseudotyped particles (CoV2pp) that can be robustly produced at scale and generate accurate neutralizing titers within 18 hours post-infection. Our standardized CoV2pp VNA showed a strong positive correlation with CoV2-S ELISA and live virus neutralizations in confirmed convalescent patient sera. Three independent groups subsequently validated our standardized CoV2pp VNA (n>120). Our data show that absolute (abs) IC50, IC80, and IC90 values can be legitimately compared across diverse cohorts, highlight the substantial but consistent variability in neutralization potency across these cohorts, and support the use of absIC80 as a more meaningful metric for assessing the neutralization potency of vaccine or convalescent sera. Lastly, we used our CoV2pp in a screen to identify ultra-permissive 293T clones that stably express ACE2 or ACE2+TMPRSS2. When used in combination with our CoV2pp, we can now produce CoV2pp sufficient for 150,000 standardized VNA/week. |
format | Online Article Text |
id | pubmed-7430605 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Cold Spring Harbor Laboratory |
record_format | MEDLINE/PubMed |
spelling | pubmed-74306052020-08-18 Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera Oguntuyo, Kasopefoluwa Y. Stevens, Christian S. Hung, Chuan-Tien Ikegame, Satoshi Acklin, Joshua A. Kowdle, Shreyas S. Carmichael, Jillian C. Chiu, Hsin-Ping Azarm, Kristopher D. Haas, Griffin D. Amanat, Fatima Klingler, Jéromine Baine, Ian Arinsburg, Suzanne Bandres, Juan C. Siddiquey, Mohammed N.A. Schilke, Robert M. Woolard, Matthew D. Zhang, Hongbo Duty, Andrew J. Kraus, Thomas A. Moran, Thomas M. Tortorella, Domenico Lim, Jean K. Gamarnik, Andrea V. Hioe, Catarina E. Zolla-Pazner, Susan Ivanov, Stanimir S. Kamil, Jeremy P. Krammer, Florian Lee, Benhur medRxiv Article The global COVID-19 pandemic has mobilized efforts to develop vaccines and antibody-based therapeutics, including convalescent plasma therapy, that inhibit viral entry by inducing or transferring neutralizing antibodies (nAbs) against the SARS-CoV-2 spike glycoprotein (CoV2-S). However, rigorous efficacy testing requires extensive screening with live virus under onerous BSL3 conditions which limits high throughput screening of patient and vaccine sera. Myriad BSL-2 compatible surrogate virus neutralization assays (VNAs) have been developed to overcome this barrier. Yet, there is marked variability between VNAs and how their results are presented, making inter-group comparisons difficult. To address these limitations, we developed a standardized VNA using VSVΔG-based CoV-2-S pseudotyped particles (CoV2pp) that can be robustly produced at scale and generate accurate neutralizing titers within 18 hours post-infection. Our standardized CoV2pp VNA showed a strong positive correlation with CoV2-S ELISA and live virus neutralizations in confirmed convalescent patient sera. Three independent groups subsequently validated our standardized CoV2pp VNA (n>120). Our data show that absolute (abs) IC50, IC80, and IC90 values can be legitimately compared across diverse cohorts, highlight the substantial but consistent variability in neutralization potency across these cohorts, and support the use of absIC80 as a more meaningful metric for assessing the neutralization potency of vaccine or convalescent sera. Lastly, we used our CoV2pp in a screen to identify ultra-permissive 293T clones that stably express ACE2 or ACE2+TMPRSS2. When used in combination with our CoV2pp, we can now produce CoV2pp sufficient for 150,000 standardized VNA/week. Cold Spring Harbor Laboratory 2020-08-27 /pmc/articles/PMC7430605/ /pubmed/32817961 http://dx.doi.org/10.1101/2020.08.13.20157222 Text en http://creativecommons.org/licenses/by-nc/4.0/It is made available under a CC-BY-NC 4.0 International license (http://creativecommons.org/licenses/by-nc/4.0/) . |
spellingShingle | Article Oguntuyo, Kasopefoluwa Y. Stevens, Christian S. Hung, Chuan-Tien Ikegame, Satoshi Acklin, Joshua A. Kowdle, Shreyas S. Carmichael, Jillian C. Chiu, Hsin-Ping Azarm, Kristopher D. Haas, Griffin D. Amanat, Fatima Klingler, Jéromine Baine, Ian Arinsburg, Suzanne Bandres, Juan C. Siddiquey, Mohammed N.A. Schilke, Robert M. Woolard, Matthew D. Zhang, Hongbo Duty, Andrew J. Kraus, Thomas A. Moran, Thomas M. Tortorella, Domenico Lim, Jean K. Gamarnik, Andrea V. Hioe, Catarina E. Zolla-Pazner, Susan Ivanov, Stanimir S. Kamil, Jeremy P. Krammer, Florian Lee, Benhur Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera |
title | Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera |
title_full | Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera |
title_fullStr | Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera |
title_full_unstemmed | Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera |
title_short | Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera |
title_sort | quantifying absolute neutralization titers against sars-cov-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of covid-19 sera |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7430605/ https://www.ncbi.nlm.nih.gov/pubmed/32817961 http://dx.doi.org/10.1101/2020.08.13.20157222 |
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