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MicroRNA dilution during oocyte growth disables the microRNA pathway in mammalian oocytes

MicroRNAs (miRNAs) are ubiquitous small RNAs guiding post-transcriptional gene repression in countless biological processes. However, the miRNA pathway in mouse oocytes appears inactive and dispensable for development. We propose that marginalization of the miRNA pathway activity stems from the cons...

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Autores principales: Kataruka, Shubhangini, Modrak, Martin, Kinterova, Veronika, Malik, Radek, Zeitler, Daniela M, Horvat, Filip, Kanka, Jiri, Meister, Gunter, Svoboda, Petr
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7430632/
https://www.ncbi.nlm.nih.gov/pubmed/32609824
http://dx.doi.org/10.1093/nar/gkaa543
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author Kataruka, Shubhangini
Modrak, Martin
Kinterova, Veronika
Malik, Radek
Zeitler, Daniela M
Horvat, Filip
Kanka, Jiri
Meister, Gunter
Svoboda, Petr
author_facet Kataruka, Shubhangini
Modrak, Martin
Kinterova, Veronika
Malik, Radek
Zeitler, Daniela M
Horvat, Filip
Kanka, Jiri
Meister, Gunter
Svoboda, Petr
author_sort Kataruka, Shubhangini
collection PubMed
description MicroRNAs (miRNAs) are ubiquitous small RNAs guiding post-transcriptional gene repression in countless biological processes. However, the miRNA pathway in mouse oocytes appears inactive and dispensable for development. We propose that marginalization of the miRNA pathway activity stems from the constraints and adaptations of RNA metabolism elicited by the diluting effects of oocyte growth. We report that miRNAs do not accumulate like mRNAs during the oocyte growth because miRNA turnover has not adapted to it. The most abundant miRNAs total tens of thousands of molecules in growing (∅ 40 μm) and fully grown (∅ 80 μm) oocytes, a number similar to that observed in much smaller fibroblasts. The lack of miRNA accumulation results in a 100-fold lower miRNA concentration in fully grown oocytes than in somatic cells. This brings a knock-down-like effect, where diluted miRNAs engage targets but are not abundant enough for significant repression. Low-miRNA concentrations were observed in rat, hamster, porcine and bovine oocytes, arguing that miRNA inactivity is not mouse-specific but a common mammalian oocyte feature. Injection of 250,000 miRNA molecules was sufficient to restore reporter repression in mouse and porcine oocytes, suggesting that miRNA inactivity comes from low-miRNA abundance and not from some suppressor of the pathway.
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spelling pubmed-74306322020-08-19 MicroRNA dilution during oocyte growth disables the microRNA pathway in mammalian oocytes Kataruka, Shubhangini Modrak, Martin Kinterova, Veronika Malik, Radek Zeitler, Daniela M Horvat, Filip Kanka, Jiri Meister, Gunter Svoboda, Petr Nucleic Acids Res RNA and RNA-protein complexes MicroRNAs (miRNAs) are ubiquitous small RNAs guiding post-transcriptional gene repression in countless biological processes. However, the miRNA pathway in mouse oocytes appears inactive and dispensable for development. We propose that marginalization of the miRNA pathway activity stems from the constraints and adaptations of RNA metabolism elicited by the diluting effects of oocyte growth. We report that miRNAs do not accumulate like mRNAs during the oocyte growth because miRNA turnover has not adapted to it. The most abundant miRNAs total tens of thousands of molecules in growing (∅ 40 μm) and fully grown (∅ 80 μm) oocytes, a number similar to that observed in much smaller fibroblasts. The lack of miRNA accumulation results in a 100-fold lower miRNA concentration in fully grown oocytes than in somatic cells. This brings a knock-down-like effect, where diluted miRNAs engage targets but are not abundant enough for significant repression. Low-miRNA concentrations were observed in rat, hamster, porcine and bovine oocytes, arguing that miRNA inactivity is not mouse-specific but a common mammalian oocyte feature. Injection of 250,000 miRNA molecules was sufficient to restore reporter repression in mouse and porcine oocytes, suggesting that miRNA inactivity comes from low-miRNA abundance and not from some suppressor of the pathway. Oxford University Press 2020-07-01 /pmc/articles/PMC7430632/ /pubmed/32609824 http://dx.doi.org/10.1093/nar/gkaa543 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle RNA and RNA-protein complexes
Kataruka, Shubhangini
Modrak, Martin
Kinterova, Veronika
Malik, Radek
Zeitler, Daniela M
Horvat, Filip
Kanka, Jiri
Meister, Gunter
Svoboda, Petr
MicroRNA dilution during oocyte growth disables the microRNA pathway in mammalian oocytes
title MicroRNA dilution during oocyte growth disables the microRNA pathway in mammalian oocytes
title_full MicroRNA dilution during oocyte growth disables the microRNA pathway in mammalian oocytes
title_fullStr MicroRNA dilution during oocyte growth disables the microRNA pathway in mammalian oocytes
title_full_unstemmed MicroRNA dilution during oocyte growth disables the microRNA pathway in mammalian oocytes
title_short MicroRNA dilution during oocyte growth disables the microRNA pathway in mammalian oocytes
title_sort microrna dilution during oocyte growth disables the microrna pathway in mammalian oocytes
topic RNA and RNA-protein complexes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7430632/
https://www.ncbi.nlm.nih.gov/pubmed/32609824
http://dx.doi.org/10.1093/nar/gkaa543
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