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When possible, report a Fisher-exact P value and display its underlying null randomization distribution
In randomized experiments, Fisher-exact P values are available and should be used to help evaluate results rather than the more commonly reported asymptotic P values. One reason is that using the latter can effectively alter the question being addressed by including irrelevant distributional assumpt...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7431075/ https://www.ncbi.nlm.nih.gov/pubmed/32703808 http://dx.doi.org/10.1073/pnas.1915454117 |
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author | Bind, M.-A. C. Rubin, D. B. |
author_facet | Bind, M.-A. C. Rubin, D. B. |
author_sort | Bind, M.-A. C. |
collection | PubMed |
description | In randomized experiments, Fisher-exact P values are available and should be used to help evaluate results rather than the more commonly reported asymptotic P values. One reason is that using the latter can effectively alter the question being addressed by including irrelevant distributional assumptions. The Fisherian statistical framework, proposed in 1925, calculates a P value in a randomized experiment by using the actual randomization procedure that led to the observed data. Here, we illustrate this Fisherian framework in a crossover randomized experiment. First, we consider the first period of the experiment and analyze its data as a completely randomized experiment, ignoring the second period; then, we consider both periods. For each analysis, we focus on 10 outcomes that illustrate important differences between the asymptotic and Fisher tests for the null hypothesis of no ozone effect. For some outcomes, the traditional P value based on the approximating asymptotic Student’s t distribution substantially subceeded the minimum attainable Fisher-exact P value. For the other outcomes, the Fisher-exact null randomization distribution substantially differed from the bell-shaped one assumed by the asymptotic t test. Our conclusions: When researchers choose to report P values in randomized experiments, 1) Fisher-exact P values should be used, especially in studies with small sample sizes, and 2) the shape of the actual null randomization distribution should be examined for the recondite scientific insights it may reveal. |
format | Online Article Text |
id | pubmed-7431075 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-74310752020-08-27 When possible, report a Fisher-exact P value and display its underlying null randomization distribution Bind, M.-A. C. Rubin, D. B. Proc Natl Acad Sci U S A Biological Sciences In randomized experiments, Fisher-exact P values are available and should be used to help evaluate results rather than the more commonly reported asymptotic P values. One reason is that using the latter can effectively alter the question being addressed by including irrelevant distributional assumptions. The Fisherian statistical framework, proposed in 1925, calculates a P value in a randomized experiment by using the actual randomization procedure that led to the observed data. Here, we illustrate this Fisherian framework in a crossover randomized experiment. First, we consider the first period of the experiment and analyze its data as a completely randomized experiment, ignoring the second period; then, we consider both periods. For each analysis, we focus on 10 outcomes that illustrate important differences between the asymptotic and Fisher tests for the null hypothesis of no ozone effect. For some outcomes, the traditional P value based on the approximating asymptotic Student’s t distribution substantially subceeded the minimum attainable Fisher-exact P value. For the other outcomes, the Fisher-exact null randomization distribution substantially differed from the bell-shaped one assumed by the asymptotic t test. Our conclusions: When researchers choose to report P values in randomized experiments, 1) Fisher-exact P values should be used, especially in studies with small sample sizes, and 2) the shape of the actual null randomization distribution should be examined for the recondite scientific insights it may reveal. National Academy of Sciences 2020-08-11 2020-07-23 /pmc/articles/PMC7431075/ /pubmed/32703808 http://dx.doi.org/10.1073/pnas.1915454117 Text en Copyright © 2020 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/ https://creativecommons.org/licenses/by-nc-nd/4.0/This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Biological Sciences Bind, M.-A. C. Rubin, D. B. When possible, report a Fisher-exact P value and display its underlying null randomization distribution |
title | When possible, report a Fisher-exact P value and display its underlying null randomization distribution |
title_full | When possible, report a Fisher-exact P value and display its underlying null randomization distribution |
title_fullStr | When possible, report a Fisher-exact P value and display its underlying null randomization distribution |
title_full_unstemmed | When possible, report a Fisher-exact P value and display its underlying null randomization distribution |
title_short | When possible, report a Fisher-exact P value and display its underlying null randomization distribution |
title_sort | when possible, report a fisher-exact p value and display its underlying null randomization distribution |
topic | Biological Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7431075/ https://www.ncbi.nlm.nih.gov/pubmed/32703808 http://dx.doi.org/10.1073/pnas.1915454117 |
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