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Exercise‐induced calf muscle hyperemia: Rapid mapping of magnetic resonance imaging using deep learning approach

Exercise‐induced hyperemia in calf muscles was recently shown to be quantifiable with high‐resolution magnetic resonance imaging (MRI). However, processing of the MRI data to obtain muscle‐perfusion maps is time‐consuming. This study proposes to substantially accelerate the mapping of muscle perfusi...

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Autores principales: Zhang, Jeff L., Conlin, Christopher C., Li, Xiaowan, Layec, Gwenael, Chang, Ken, Kalpathy‐Cramer, Jayashree, Lee, Vivian S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7435025/
https://www.ncbi.nlm.nih.gov/pubmed/32812401
http://dx.doi.org/10.14814/phy2.14563
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author Zhang, Jeff L.
Conlin, Christopher C.
Li, Xiaowan
Layec, Gwenael
Chang, Ken
Kalpathy‐Cramer, Jayashree
Lee, Vivian S.
author_facet Zhang, Jeff L.
Conlin, Christopher C.
Li, Xiaowan
Layec, Gwenael
Chang, Ken
Kalpathy‐Cramer, Jayashree
Lee, Vivian S.
author_sort Zhang, Jeff L.
collection PubMed
description Exercise‐induced hyperemia in calf muscles was recently shown to be quantifiable with high‐resolution magnetic resonance imaging (MRI). However, processing of the MRI data to obtain muscle‐perfusion maps is time‐consuming. This study proposes to substantially accelerate the mapping of muscle perfusion using a deep‐learning method called artificial neural network (NN). Forty‐eight MRI scans were acquired from 21 healthy subjects and patients with peripheral artery disease (PAD). For optimal training of NN, different training‐data sets were compared, investigating the effect of data diversity and reference perfusion accuracy. Reference perfusion was estimated by tracer kinetic model fitting initialized with multiple values (multigrid model fitting). Result: The NN method was much faster than tracer kinetic model fitting. To generate a perfusion map of matrix 128 × 128 on a same computer, multigrid model fitting took about 80 min, single‐grid or regular model fitting about 3 min, while the NN method took about 1 s. Compared to the reference values, NN trained with a diverse group gave estimates with mean absolute error (MAE) of 15.9 ml/min/100g and correlation coefficient (R) of 0.949, significantly more accurate than regular model fitting (MAE 22.3 ml/min/100g, R 0.889, p < .001). Conclusion: the NN method enables rapid perfusion mapping, and if properly trained, estimates perfusion with accuracy comparable to multigrid model fitting.
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spelling pubmed-74350252020-08-20 Exercise‐induced calf muscle hyperemia: Rapid mapping of magnetic resonance imaging using deep learning approach Zhang, Jeff L. Conlin, Christopher C. Li, Xiaowan Layec, Gwenael Chang, Ken Kalpathy‐Cramer, Jayashree Lee, Vivian S. Physiol Rep Original Research Exercise‐induced hyperemia in calf muscles was recently shown to be quantifiable with high‐resolution magnetic resonance imaging (MRI). However, processing of the MRI data to obtain muscle‐perfusion maps is time‐consuming. This study proposes to substantially accelerate the mapping of muscle perfusion using a deep‐learning method called artificial neural network (NN). Forty‐eight MRI scans were acquired from 21 healthy subjects and patients with peripheral artery disease (PAD). For optimal training of NN, different training‐data sets were compared, investigating the effect of data diversity and reference perfusion accuracy. Reference perfusion was estimated by tracer kinetic model fitting initialized with multiple values (multigrid model fitting). Result: The NN method was much faster than tracer kinetic model fitting. To generate a perfusion map of matrix 128 × 128 on a same computer, multigrid model fitting took about 80 min, single‐grid or regular model fitting about 3 min, while the NN method took about 1 s. Compared to the reference values, NN trained with a diverse group gave estimates with mean absolute error (MAE) of 15.9 ml/min/100g and correlation coefficient (R) of 0.949, significantly more accurate than regular model fitting (MAE 22.3 ml/min/100g, R 0.889, p < .001). Conclusion: the NN method enables rapid perfusion mapping, and if properly trained, estimates perfusion with accuracy comparable to multigrid model fitting. John Wiley and Sons Inc. 2020-08-18 /pmc/articles/PMC7435025/ /pubmed/32812401 http://dx.doi.org/10.14814/phy2.14563 Text en © 2020 The Authors. Physiological Reports published by Wiley Periodicals LLC on behalf of The Physiological Society and the American Physiological Society This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Zhang, Jeff L.
Conlin, Christopher C.
Li, Xiaowan
Layec, Gwenael
Chang, Ken
Kalpathy‐Cramer, Jayashree
Lee, Vivian S.
Exercise‐induced calf muscle hyperemia: Rapid mapping of magnetic resonance imaging using deep learning approach
title Exercise‐induced calf muscle hyperemia: Rapid mapping of magnetic resonance imaging using deep learning approach
title_full Exercise‐induced calf muscle hyperemia: Rapid mapping of magnetic resonance imaging using deep learning approach
title_fullStr Exercise‐induced calf muscle hyperemia: Rapid mapping of magnetic resonance imaging using deep learning approach
title_full_unstemmed Exercise‐induced calf muscle hyperemia: Rapid mapping of magnetic resonance imaging using deep learning approach
title_short Exercise‐induced calf muscle hyperemia: Rapid mapping of magnetic resonance imaging using deep learning approach
title_sort exercise‐induced calf muscle hyperemia: rapid mapping of magnetic resonance imaging using deep learning approach
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7435025/
https://www.ncbi.nlm.nih.gov/pubmed/32812401
http://dx.doi.org/10.14814/phy2.14563
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