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Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus zalihae

A comparative structure analysis between space- and an Earth-grown T1 recombinant lipase from Geobacillus zalihae had shown changes in the formation of hydrogen bonds and ion-pair interactions. Using the space-grown T1 lipase validated structure having incorporated said interactions, the recombinant...

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Autores principales: Ishak, Siti Nor Hasmah, Kamarudin, Nor Hafizah Ahmad, Ali, Mohd Shukuri Mohamad, Leow, Adam Thean Chor, Rahman, Raja Noor Zaliha Raja Abd.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7435748/
https://www.ncbi.nlm.nih.gov/pubmed/32731607
http://dx.doi.org/10.3390/molecules25153430
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author Ishak, Siti Nor Hasmah
Kamarudin, Nor Hafizah Ahmad
Ali, Mohd Shukuri Mohamad
Leow, Adam Thean Chor
Rahman, Raja Noor Zaliha Raja Abd.
author_facet Ishak, Siti Nor Hasmah
Kamarudin, Nor Hafizah Ahmad
Ali, Mohd Shukuri Mohamad
Leow, Adam Thean Chor
Rahman, Raja Noor Zaliha Raja Abd.
author_sort Ishak, Siti Nor Hasmah
collection PubMed
description A comparative structure analysis between space- and an Earth-grown T1 recombinant lipase from Geobacillus zalihae had shown changes in the formation of hydrogen bonds and ion-pair interactions. Using the space-grown T1 lipase validated structure having incorporated said interactions, the recombinant T1 lipase was re-engineered to determine the changes brought by these interactions to the structure and stability of lipase. To understand the effects of mutation on T1 recombinant lipase, five mutants were developed from the structure of space-grown T1 lipase and biochemically characterized. The results demonstrate an increase in melting temperature up to 77.4 °C and 76.0 °C in E226D and D43E, respectively. Moreover, the mutated lipases D43E and E226D had additional hydrogen bonds and ion-pair interactions in their structures due to the improvement of stability, as observed in a longer half-life and an increased melting temperature. The biophysical study revealed differences in β-Sheet percentage between less stable (T118N) and other mutants. As a conclusion, the comparative analysis of the tertiary structure and specific residues associated with ion-pair interactions and hydrogen bonds could be significant in revealing the thermostability of an enzyme with industrial importance.
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spelling pubmed-74357482020-08-25 Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus zalihae Ishak, Siti Nor Hasmah Kamarudin, Nor Hafizah Ahmad Ali, Mohd Shukuri Mohamad Leow, Adam Thean Chor Rahman, Raja Noor Zaliha Raja Abd. Molecules Article A comparative structure analysis between space- and an Earth-grown T1 recombinant lipase from Geobacillus zalihae had shown changes in the formation of hydrogen bonds and ion-pair interactions. Using the space-grown T1 lipase validated structure having incorporated said interactions, the recombinant T1 lipase was re-engineered to determine the changes brought by these interactions to the structure and stability of lipase. To understand the effects of mutation on T1 recombinant lipase, five mutants were developed from the structure of space-grown T1 lipase and biochemically characterized. The results demonstrate an increase in melting temperature up to 77.4 °C and 76.0 °C in E226D and D43E, respectively. Moreover, the mutated lipases D43E and E226D had additional hydrogen bonds and ion-pair interactions in their structures due to the improvement of stability, as observed in a longer half-life and an increased melting temperature. The biophysical study revealed differences in β-Sheet percentage between less stable (T118N) and other mutants. As a conclusion, the comparative analysis of the tertiary structure and specific residues associated with ion-pair interactions and hydrogen bonds could be significant in revealing the thermostability of an enzyme with industrial importance. MDPI 2020-07-28 /pmc/articles/PMC7435748/ /pubmed/32731607 http://dx.doi.org/10.3390/molecules25153430 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ishak, Siti Nor Hasmah
Kamarudin, Nor Hafizah Ahmad
Ali, Mohd Shukuri Mohamad
Leow, Adam Thean Chor
Rahman, Raja Noor Zaliha Raja Abd.
Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus zalihae
title Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus zalihae
title_full Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus zalihae
title_fullStr Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus zalihae
title_full_unstemmed Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus zalihae
title_short Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus zalihae
title_sort ion-pair interaction and hydrogen bonds as main features of protein thermostability in mutated t1 recombinant lipase originating from geobacillus zalihae
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7435748/
https://www.ncbi.nlm.nih.gov/pubmed/32731607
http://dx.doi.org/10.3390/molecules25153430
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