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Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus zalihae
A comparative structure analysis between space- and an Earth-grown T1 recombinant lipase from Geobacillus zalihae had shown changes in the formation of hydrogen bonds and ion-pair interactions. Using the space-grown T1 lipase validated structure having incorporated said interactions, the recombinant...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7435748/ https://www.ncbi.nlm.nih.gov/pubmed/32731607 http://dx.doi.org/10.3390/molecules25153430 |
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author | Ishak, Siti Nor Hasmah Kamarudin, Nor Hafizah Ahmad Ali, Mohd Shukuri Mohamad Leow, Adam Thean Chor Rahman, Raja Noor Zaliha Raja Abd. |
author_facet | Ishak, Siti Nor Hasmah Kamarudin, Nor Hafizah Ahmad Ali, Mohd Shukuri Mohamad Leow, Adam Thean Chor Rahman, Raja Noor Zaliha Raja Abd. |
author_sort | Ishak, Siti Nor Hasmah |
collection | PubMed |
description | A comparative structure analysis between space- and an Earth-grown T1 recombinant lipase from Geobacillus zalihae had shown changes in the formation of hydrogen bonds and ion-pair interactions. Using the space-grown T1 lipase validated structure having incorporated said interactions, the recombinant T1 lipase was re-engineered to determine the changes brought by these interactions to the structure and stability of lipase. To understand the effects of mutation on T1 recombinant lipase, five mutants were developed from the structure of space-grown T1 lipase and biochemically characterized. The results demonstrate an increase in melting temperature up to 77.4 °C and 76.0 °C in E226D and D43E, respectively. Moreover, the mutated lipases D43E and E226D had additional hydrogen bonds and ion-pair interactions in their structures due to the improvement of stability, as observed in a longer half-life and an increased melting temperature. The biophysical study revealed differences in β-Sheet percentage between less stable (T118N) and other mutants. As a conclusion, the comparative analysis of the tertiary structure and specific residues associated with ion-pair interactions and hydrogen bonds could be significant in revealing the thermostability of an enzyme with industrial importance. |
format | Online Article Text |
id | pubmed-7435748 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-74357482020-08-25 Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus zalihae Ishak, Siti Nor Hasmah Kamarudin, Nor Hafizah Ahmad Ali, Mohd Shukuri Mohamad Leow, Adam Thean Chor Rahman, Raja Noor Zaliha Raja Abd. Molecules Article A comparative structure analysis between space- and an Earth-grown T1 recombinant lipase from Geobacillus zalihae had shown changes in the formation of hydrogen bonds and ion-pair interactions. Using the space-grown T1 lipase validated structure having incorporated said interactions, the recombinant T1 lipase was re-engineered to determine the changes brought by these interactions to the structure and stability of lipase. To understand the effects of mutation on T1 recombinant lipase, five mutants were developed from the structure of space-grown T1 lipase and biochemically characterized. The results demonstrate an increase in melting temperature up to 77.4 °C and 76.0 °C in E226D and D43E, respectively. Moreover, the mutated lipases D43E and E226D had additional hydrogen bonds and ion-pair interactions in their structures due to the improvement of stability, as observed in a longer half-life and an increased melting temperature. The biophysical study revealed differences in β-Sheet percentage between less stable (T118N) and other mutants. As a conclusion, the comparative analysis of the tertiary structure and specific residues associated with ion-pair interactions and hydrogen bonds could be significant in revealing the thermostability of an enzyme with industrial importance. MDPI 2020-07-28 /pmc/articles/PMC7435748/ /pubmed/32731607 http://dx.doi.org/10.3390/molecules25153430 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Ishak, Siti Nor Hasmah Kamarudin, Nor Hafizah Ahmad Ali, Mohd Shukuri Mohamad Leow, Adam Thean Chor Rahman, Raja Noor Zaliha Raja Abd. Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus zalihae |
title | Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus
zalihae |
title_full | Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus
zalihae |
title_fullStr | Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus
zalihae |
title_full_unstemmed | Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus
zalihae |
title_short | Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus
zalihae |
title_sort | ion-pair interaction and hydrogen bonds as main features of protein thermostability in mutated t1 recombinant lipase originating from geobacillus
zalihae |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7435748/ https://www.ncbi.nlm.nih.gov/pubmed/32731607 http://dx.doi.org/10.3390/molecules25153430 |
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