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Spatio-temporal estimation of the daily cases of COVID-19 in worldwide using random forest machine learning algorithm

Novel Coronavirus pandemic, which negatively affected public health in social, psychological and economical terms, spread to the whole world in a short period of 6 months. However, the rate of increase in cases was not equal for every country. The measures implemented by the countries changed the da...

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Autor principal: Yeşilkanat, Cafer Mert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7439995/
https://www.ncbi.nlm.nih.gov/pubmed/32843823
http://dx.doi.org/10.1016/j.chaos.2020.110210
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author Yeşilkanat, Cafer Mert
author_facet Yeşilkanat, Cafer Mert
author_sort Yeşilkanat, Cafer Mert
collection PubMed
description Novel Coronavirus pandemic, which negatively affected public health in social, psychological and economical terms, spread to the whole world in a short period of 6 months. However, the rate of increase in cases was not equal for every country. The measures implemented by the countries changed the daily spreading speed of the disease. This was determined by changes in the number of daily cases. In this study, the performance of the Random Forest (RF) machine learning algorithm was investigated in estimating the near future case numbers for 190 countries in the world and it is mapped in comparison with actual confirmed cases results. The number of confirmed cases between 23/01/2020 - 17/06/2020 were divided into 3 main sub-datasets: training sub-data, testing sub-data (interpolation data) and estimating sub-data (extrapolation data) for the random forest model. At the end of the study, it has been found that R(2) values for testing sub-data of RF model estimates range between 0.843 and 0.995 (average R(2)= 0.959), and RMSE values between 141.76 and 526.18 (mean RMSE = 259.38); and that R(2) values for estimating sub-data range between 0.690 and 0.968 (mean R(2) = 0.914), and RMSE values between 549.73 and 2500.79 (mean RMSE = 909.37). These results show that the random forest machine learning algorithm performs well in estimating the number of cases for the near future in case of an epidemic like Novel Coronavirus, which outbreaks suddenly and spreads rapidly.
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spelling pubmed-74399952020-08-21 Spatio-temporal estimation of the daily cases of COVID-19 in worldwide using random forest machine learning algorithm Yeşilkanat, Cafer Mert Chaos Solitons Fractals Article Novel Coronavirus pandemic, which negatively affected public health in social, psychological and economical terms, spread to the whole world in a short period of 6 months. However, the rate of increase in cases was not equal for every country. The measures implemented by the countries changed the daily spreading speed of the disease. This was determined by changes in the number of daily cases. In this study, the performance of the Random Forest (RF) machine learning algorithm was investigated in estimating the near future case numbers for 190 countries in the world and it is mapped in comparison with actual confirmed cases results. The number of confirmed cases between 23/01/2020 - 17/06/2020 were divided into 3 main sub-datasets: training sub-data, testing sub-data (interpolation data) and estimating sub-data (extrapolation data) for the random forest model. At the end of the study, it has been found that R(2) values for testing sub-data of RF model estimates range between 0.843 and 0.995 (average R(2)= 0.959), and RMSE values between 141.76 and 526.18 (mean RMSE = 259.38); and that R(2) values for estimating sub-data range between 0.690 and 0.968 (mean R(2) = 0.914), and RMSE values between 549.73 and 2500.79 (mean RMSE = 909.37). These results show that the random forest machine learning algorithm performs well in estimating the number of cases for the near future in case of an epidemic like Novel Coronavirus, which outbreaks suddenly and spreads rapidly. Elsevier Ltd. 2020-11 2020-08-20 /pmc/articles/PMC7439995/ /pubmed/32843823 http://dx.doi.org/10.1016/j.chaos.2020.110210 Text en © 2020 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Yeşilkanat, Cafer Mert
Spatio-temporal estimation of the daily cases of COVID-19 in worldwide using random forest machine learning algorithm
title Spatio-temporal estimation of the daily cases of COVID-19 in worldwide using random forest machine learning algorithm
title_full Spatio-temporal estimation of the daily cases of COVID-19 in worldwide using random forest machine learning algorithm
title_fullStr Spatio-temporal estimation of the daily cases of COVID-19 in worldwide using random forest machine learning algorithm
title_full_unstemmed Spatio-temporal estimation of the daily cases of COVID-19 in worldwide using random forest machine learning algorithm
title_short Spatio-temporal estimation of the daily cases of COVID-19 in worldwide using random forest machine learning algorithm
title_sort spatio-temporal estimation of the daily cases of covid-19 in worldwide using random forest machine learning algorithm
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7439995/
https://www.ncbi.nlm.nih.gov/pubmed/32843823
http://dx.doi.org/10.1016/j.chaos.2020.110210
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