Cargando…

Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification

PURPOSE: Diagnosis of ocular graft-versus-host disease (oGVHD) is hampered by a lack of clinically-validated biomarkers. This study aims to predict disease severity on the basis of tear protein expression in mild oGVHD. METHODS: Forty-nine patients with and without chronic oGVHD after AHCT were recr...

Descripción completa

Detalles Bibliográficos
Autores principales: O'Leary, Olivia E., Schoetzau, Andreas, Amruthalingam, Ludovic, Geber-Hollbach, Nadine, Plattner, Kim, Jenoe, Paul, Schmidt, Alexander, Ullmer, Christoph, Drawnel, Faye M., Fauser, Sascha, Scholl, Hendrik P. N., Passweg, Jakob, Halter, Joerg P., Goldblum, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7442883/
https://www.ncbi.nlm.nih.gov/pubmed/32879760
http://dx.doi.org/10.1167/tvst.9.9.3
_version_ 1783573523374014464
author O'Leary, Olivia E.
Schoetzau, Andreas
Amruthalingam, Ludovic
Geber-Hollbach, Nadine
Plattner, Kim
Jenoe, Paul
Schmidt, Alexander
Ullmer, Christoph
Drawnel, Faye M.
Fauser, Sascha
Scholl, Hendrik P. N.
Passweg, Jakob
Halter, Joerg P.
Goldblum, David
author_facet O'Leary, Olivia E.
Schoetzau, Andreas
Amruthalingam, Ludovic
Geber-Hollbach, Nadine
Plattner, Kim
Jenoe, Paul
Schmidt, Alexander
Ullmer, Christoph
Drawnel, Faye M.
Fauser, Sascha
Scholl, Hendrik P. N.
Passweg, Jakob
Halter, Joerg P.
Goldblum, David
author_sort O'Leary, Olivia E.
collection PubMed
description PURPOSE: Diagnosis of ocular graft-versus-host disease (oGVHD) is hampered by a lack of clinically-validated biomarkers. This study aims to predict disease severity on the basis of tear protein expression in mild oGVHD. METHODS: Forty-nine patients with and without chronic oGVHD after AHCT were recruited to a cross-sectional observational study. Patients were stratified using NIH guidelines for oGVHD severity: NIH 0 (none; n = 14), NIH 1 (mild; n = 9), NIH 2 (moderate; n = 16), and NIH 3 (severe; n = 10). The proteomic profile of tears was analyzed using liquid chromatography-tandem mass spectrometry. Random forest and penalized logistic regression were used to generate classification and prediction models to stratify patients according to disease severity. RESULTS: Mass spectrometry detected 785 proteins across all samples. A random forest model used to classify patients by disease grade achieved F1-measure values for correct classification of 0.95 (NIH 0), 0.8 (NIH 1), 0.74 (NIH 2), and 0.83 (NIH 3). A penalized logistic regression model was generated by comparing patients without oGVHD and those with mild oGVHD and applied to identify potential biomarkers present early in disease. A panel of 13 discriminant markers achieved significant diagnostic accuracy in identifying patients with moderate-to-severe disease. CONCLUSIONS: Our work demonstrates the utility of tear protein biomarkers in classifying oGVHD severity and adds further evidence indicating ocular surface inflammation as a main driver of oGVHD clinical phenotype. TRANSLATIONAL RELEVANCE: Expression levels of a 13-marker tear protein panel in AHCT patients with mild oGVHD may predict development of more severe oGVHD clinical phenotypes.
format Online
Article
Text
id pubmed-7442883
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher The Association for Research in Vision and Ophthalmology
record_format MEDLINE/PubMed
spelling pubmed-74428832020-09-01 Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification O'Leary, Olivia E. Schoetzau, Andreas Amruthalingam, Ludovic Geber-Hollbach, Nadine Plattner, Kim Jenoe, Paul Schmidt, Alexander Ullmer, Christoph Drawnel, Faye M. Fauser, Sascha Scholl, Hendrik P. N. Passweg, Jakob Halter, Joerg P. Goldblum, David Transl Vis Sci Technol Article PURPOSE: Diagnosis of ocular graft-versus-host disease (oGVHD) is hampered by a lack of clinically-validated biomarkers. This study aims to predict disease severity on the basis of tear protein expression in mild oGVHD. METHODS: Forty-nine patients with and without chronic oGVHD after AHCT were recruited to a cross-sectional observational study. Patients were stratified using NIH guidelines for oGVHD severity: NIH 0 (none; n = 14), NIH 1 (mild; n = 9), NIH 2 (moderate; n = 16), and NIH 3 (severe; n = 10). The proteomic profile of tears was analyzed using liquid chromatography-tandem mass spectrometry. Random forest and penalized logistic regression were used to generate classification and prediction models to stratify patients according to disease severity. RESULTS: Mass spectrometry detected 785 proteins across all samples. A random forest model used to classify patients by disease grade achieved F1-measure values for correct classification of 0.95 (NIH 0), 0.8 (NIH 1), 0.74 (NIH 2), and 0.83 (NIH 3). A penalized logistic regression model was generated by comparing patients without oGVHD and those with mild oGVHD and applied to identify potential biomarkers present early in disease. A panel of 13 discriminant markers achieved significant diagnostic accuracy in identifying patients with moderate-to-severe disease. CONCLUSIONS: Our work demonstrates the utility of tear protein biomarkers in classifying oGVHD severity and adds further evidence indicating ocular surface inflammation as a main driver of oGVHD clinical phenotype. TRANSLATIONAL RELEVANCE: Expression levels of a 13-marker tear protein panel in AHCT patients with mild oGVHD may predict development of more severe oGVHD clinical phenotypes. The Association for Research in Vision and Ophthalmology 2020-08-03 /pmc/articles/PMC7442883/ /pubmed/32879760 http://dx.doi.org/10.1167/tvst.9.9.3 Text en Copyright 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
spellingShingle Article
O'Leary, Olivia E.
Schoetzau, Andreas
Amruthalingam, Ludovic
Geber-Hollbach, Nadine
Plattner, Kim
Jenoe, Paul
Schmidt, Alexander
Ullmer, Christoph
Drawnel, Faye M.
Fauser, Sascha
Scholl, Hendrik P. N.
Passweg, Jakob
Halter, Joerg P.
Goldblum, David
Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification
title Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification
title_full Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification
title_fullStr Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification
title_full_unstemmed Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification
title_short Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification
title_sort tear proteomic predictive biomarker model for ocular graft versus host disease classification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7442883/
https://www.ncbi.nlm.nih.gov/pubmed/32879760
http://dx.doi.org/10.1167/tvst.9.9.3
work_keys_str_mv AT olearyoliviae tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification
AT schoetzauandreas tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification
AT amruthalingamludovic tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification
AT geberhollbachnadine tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification
AT plattnerkim tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification
AT jenoepaul tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification
AT schmidtalexander tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification
AT ullmerchristoph tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification
AT drawnelfayem tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification
AT fausersascha tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification
AT schollhendrikpn tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification
AT passwegjakob tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification
AT halterjoergp tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification
AT goldblumdavid tearproteomicpredictivebiomarkermodelforoculargraftversushostdiseaseclassification