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Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification
PURPOSE: Diagnosis of ocular graft-versus-host disease (oGVHD) is hampered by a lack of clinically-validated biomarkers. This study aims to predict disease severity on the basis of tear protein expression in mild oGVHD. METHODS: Forty-nine patients with and without chronic oGVHD after AHCT were recr...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Association for Research in Vision and Ophthalmology
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7442883/ https://www.ncbi.nlm.nih.gov/pubmed/32879760 http://dx.doi.org/10.1167/tvst.9.9.3 |
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author | O'Leary, Olivia E. Schoetzau, Andreas Amruthalingam, Ludovic Geber-Hollbach, Nadine Plattner, Kim Jenoe, Paul Schmidt, Alexander Ullmer, Christoph Drawnel, Faye M. Fauser, Sascha Scholl, Hendrik P. N. Passweg, Jakob Halter, Joerg P. Goldblum, David |
author_facet | O'Leary, Olivia E. Schoetzau, Andreas Amruthalingam, Ludovic Geber-Hollbach, Nadine Plattner, Kim Jenoe, Paul Schmidt, Alexander Ullmer, Christoph Drawnel, Faye M. Fauser, Sascha Scholl, Hendrik P. N. Passweg, Jakob Halter, Joerg P. Goldblum, David |
author_sort | O'Leary, Olivia E. |
collection | PubMed |
description | PURPOSE: Diagnosis of ocular graft-versus-host disease (oGVHD) is hampered by a lack of clinically-validated biomarkers. This study aims to predict disease severity on the basis of tear protein expression in mild oGVHD. METHODS: Forty-nine patients with and without chronic oGVHD after AHCT were recruited to a cross-sectional observational study. Patients were stratified using NIH guidelines for oGVHD severity: NIH 0 (none; n = 14), NIH 1 (mild; n = 9), NIH 2 (moderate; n = 16), and NIH 3 (severe; n = 10). The proteomic profile of tears was analyzed using liquid chromatography-tandem mass spectrometry. Random forest and penalized logistic regression were used to generate classification and prediction models to stratify patients according to disease severity. RESULTS: Mass spectrometry detected 785 proteins across all samples. A random forest model used to classify patients by disease grade achieved F1-measure values for correct classification of 0.95 (NIH 0), 0.8 (NIH 1), 0.74 (NIH 2), and 0.83 (NIH 3). A penalized logistic regression model was generated by comparing patients without oGVHD and those with mild oGVHD and applied to identify potential biomarkers present early in disease. A panel of 13 discriminant markers achieved significant diagnostic accuracy in identifying patients with moderate-to-severe disease. CONCLUSIONS: Our work demonstrates the utility of tear protein biomarkers in classifying oGVHD severity and adds further evidence indicating ocular surface inflammation as a main driver of oGVHD clinical phenotype. TRANSLATIONAL RELEVANCE: Expression levels of a 13-marker tear protein panel in AHCT patients with mild oGVHD may predict development of more severe oGVHD clinical phenotypes. |
format | Online Article Text |
id | pubmed-7442883 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | The Association for Research in Vision and Ophthalmology |
record_format | MEDLINE/PubMed |
spelling | pubmed-74428832020-09-01 Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification O'Leary, Olivia E. Schoetzau, Andreas Amruthalingam, Ludovic Geber-Hollbach, Nadine Plattner, Kim Jenoe, Paul Schmidt, Alexander Ullmer, Christoph Drawnel, Faye M. Fauser, Sascha Scholl, Hendrik P. N. Passweg, Jakob Halter, Joerg P. Goldblum, David Transl Vis Sci Technol Article PURPOSE: Diagnosis of ocular graft-versus-host disease (oGVHD) is hampered by a lack of clinically-validated biomarkers. This study aims to predict disease severity on the basis of tear protein expression in mild oGVHD. METHODS: Forty-nine patients with and without chronic oGVHD after AHCT were recruited to a cross-sectional observational study. Patients were stratified using NIH guidelines for oGVHD severity: NIH 0 (none; n = 14), NIH 1 (mild; n = 9), NIH 2 (moderate; n = 16), and NIH 3 (severe; n = 10). The proteomic profile of tears was analyzed using liquid chromatography-tandem mass spectrometry. Random forest and penalized logistic regression were used to generate classification and prediction models to stratify patients according to disease severity. RESULTS: Mass spectrometry detected 785 proteins across all samples. A random forest model used to classify patients by disease grade achieved F1-measure values for correct classification of 0.95 (NIH 0), 0.8 (NIH 1), 0.74 (NIH 2), and 0.83 (NIH 3). A penalized logistic regression model was generated by comparing patients without oGVHD and those with mild oGVHD and applied to identify potential biomarkers present early in disease. A panel of 13 discriminant markers achieved significant diagnostic accuracy in identifying patients with moderate-to-severe disease. CONCLUSIONS: Our work demonstrates the utility of tear protein biomarkers in classifying oGVHD severity and adds further evidence indicating ocular surface inflammation as a main driver of oGVHD clinical phenotype. TRANSLATIONAL RELEVANCE: Expression levels of a 13-marker tear protein panel in AHCT patients with mild oGVHD may predict development of more severe oGVHD clinical phenotypes. The Association for Research in Vision and Ophthalmology 2020-08-03 /pmc/articles/PMC7442883/ /pubmed/32879760 http://dx.doi.org/10.1167/tvst.9.9.3 Text en Copyright 2020 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. |
spellingShingle | Article O'Leary, Olivia E. Schoetzau, Andreas Amruthalingam, Ludovic Geber-Hollbach, Nadine Plattner, Kim Jenoe, Paul Schmidt, Alexander Ullmer, Christoph Drawnel, Faye M. Fauser, Sascha Scholl, Hendrik P. N. Passweg, Jakob Halter, Joerg P. Goldblum, David Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification |
title | Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification |
title_full | Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification |
title_fullStr | Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification |
title_full_unstemmed | Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification |
title_short | Tear Proteomic Predictive Biomarker Model for Ocular Graft Versus Host Disease Classification |
title_sort | tear proteomic predictive biomarker model for ocular graft versus host disease classification |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7442883/ https://www.ncbi.nlm.nih.gov/pubmed/32879760 http://dx.doi.org/10.1167/tvst.9.9.3 |
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