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Alpha thalassemia genotypes in Kuwait

BACKGROUND: The frequency of the alpha thalassemia trait is approximately 40% in the Kuwaiti population, but there has been no comprehensive study of the prevalent alleles. This is a report of patients who were referred for molecular diagnosis over a 20-year period. METHODS: This is a retrospective...

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Autores principales: Adekile, Adekunle, Sukumaran, Jalaja, Thomas, Diana, D’Souza, Thomas, Haider, Mohammad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7444039/
https://www.ncbi.nlm.nih.gov/pubmed/32831051
http://dx.doi.org/10.1186/s12881-020-01105-y
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author Adekile, Adekunle
Sukumaran, Jalaja
Thomas, Diana
D’Souza, Thomas
Haider, Mohammad
author_facet Adekile, Adekunle
Sukumaran, Jalaja
Thomas, Diana
D’Souza, Thomas
Haider, Mohammad
author_sort Adekile, Adekunle
collection PubMed
description BACKGROUND: The frequency of the alpha thalassemia trait is approximately 40% in the Kuwaiti population, but there has been no comprehensive study of the prevalent alleles. This is a report of patients who were referred for molecular diagnosis over a 20-year period. METHODS: This is a retrospective study of the α-globin genotypes obtained in the Hemoglobin Research Laboratory of the Department of Pediatrics, Kuwait University from 1994 to 2015. Genotyping was performed by a combination of PCR, allele-specific oligonucleotide hybridization and reverse dot blot hybridization (Vienna Lab Strip Assay). RESULTS: Four hundred samples were characterized and analyzed from individuals aged < 1 month to 80 years, with a median of 6 years from 283 unrelated families. Most (90.8%) were Kuwaiti nationals. The commonest genotype was homozygosity for the polyadenylation-1 mutation (α(PA-1)α/α (PA-1)α) in 33.3% of the samples, followed by heterozygosity (αα/α (PA-1)α) for the same mutation in 32.3%. PA-1 was therefore the most frequent allele (0.59). The frequency of the α(0) (−-(MED)) allele was 0.017. Rare alleles that were found in very low frequencies included α(0) (−-(FIL)) in a Filipino child, Hb Constant Spring, Hb Adana, and Hb Icaria. CONCLUSION: There is a wide variety of alpha thalassemia alleles among Kuwaitis, but nondeletional PA-1 is by far the most common cause of the moderate to severe HbH (β4 tetramer) disease phenotype. The α(0) (−(MED)) allele is also encountered, which has implications for premarital counseling, especially for the possibility of having babies with alpha thalassemia major (Barts hydrops fetalis).
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spelling pubmed-74440392020-08-25 Alpha thalassemia genotypes in Kuwait Adekile, Adekunle Sukumaran, Jalaja Thomas, Diana D’Souza, Thomas Haider, Mohammad BMC Med Genet Research Article BACKGROUND: The frequency of the alpha thalassemia trait is approximately 40% in the Kuwaiti population, but there has been no comprehensive study of the prevalent alleles. This is a report of patients who were referred for molecular diagnosis over a 20-year period. METHODS: This is a retrospective study of the α-globin genotypes obtained in the Hemoglobin Research Laboratory of the Department of Pediatrics, Kuwait University from 1994 to 2015. Genotyping was performed by a combination of PCR, allele-specific oligonucleotide hybridization and reverse dot blot hybridization (Vienna Lab Strip Assay). RESULTS: Four hundred samples were characterized and analyzed from individuals aged < 1 month to 80 years, with a median of 6 years from 283 unrelated families. Most (90.8%) were Kuwaiti nationals. The commonest genotype was homozygosity for the polyadenylation-1 mutation (α(PA-1)α/α (PA-1)α) in 33.3% of the samples, followed by heterozygosity (αα/α (PA-1)α) for the same mutation in 32.3%. PA-1 was therefore the most frequent allele (0.59). The frequency of the α(0) (−-(MED)) allele was 0.017. Rare alleles that were found in very low frequencies included α(0) (−-(FIL)) in a Filipino child, Hb Constant Spring, Hb Adana, and Hb Icaria. CONCLUSION: There is a wide variety of alpha thalassemia alleles among Kuwaitis, but nondeletional PA-1 is by far the most common cause of the moderate to severe HbH (β4 tetramer) disease phenotype. The α(0) (−(MED)) allele is also encountered, which has implications for premarital counseling, especially for the possibility of having babies with alpha thalassemia major (Barts hydrops fetalis). BioMed Central 2020-08-24 /pmc/articles/PMC7444039/ /pubmed/32831051 http://dx.doi.org/10.1186/s12881-020-01105-y Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Adekile, Adekunle
Sukumaran, Jalaja
Thomas, Diana
D’Souza, Thomas
Haider, Mohammad
Alpha thalassemia genotypes in Kuwait
title Alpha thalassemia genotypes in Kuwait
title_full Alpha thalassemia genotypes in Kuwait
title_fullStr Alpha thalassemia genotypes in Kuwait
title_full_unstemmed Alpha thalassemia genotypes in Kuwait
title_short Alpha thalassemia genotypes in Kuwait
title_sort alpha thalassemia genotypes in kuwait
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7444039/
https://www.ncbi.nlm.nih.gov/pubmed/32831051
http://dx.doi.org/10.1186/s12881-020-01105-y
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