Cargando…

Establishment and application of a multiple cross displacement amplification combined with nanoparticles-based biosensor method for the detection of Bordetella pertussis

BACKGROUND: Bordetella pertussis is the causative agent of pertussis, a respiratory tract infectious disease. Efficient techniques for detection of B. pertussis isolates are important for clinical diagnosis. Multiple cross displacement amplification (MCDA), a novel isothermal amplification based mol...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Shijun, Liu, Chunting, Liu, Ying, Ma, Qing, Wang, Yue, Wang, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7444059/
https://www.ncbi.nlm.nih.gov/pubmed/32831029
http://dx.doi.org/10.1186/s12866-020-01945-x
_version_ 1783573730975285248
author Li, Shijun
Liu, Chunting
Liu, Ying
Ma, Qing
Wang, Yue
Wang, Yi
author_facet Li, Shijun
Liu, Chunting
Liu, Ying
Ma, Qing
Wang, Yue
Wang, Yi
author_sort Li, Shijun
collection PubMed
description BACKGROUND: Bordetella pertussis is the causative agent of pertussis, a respiratory tract infectious disease. Efficient techniques for detection of B. pertussis isolates are important for clinical diagnosis. Multiple cross displacement amplification (MCDA), a novel isothermal amplification based molecular detection method, has been developed to overcome the technical drawback of the current methods in recent years. This aim of this study is to develop a MCDA with Nanoparticles-based Lateral Flow Biosensor (MCDA-LFB) for the detection of B. pertussis. RESULTS: A set of 10 primers based on the pertussis toxin (PT) promoter region sequence of B. pertussis was designed. The B. pertussis-MCDA-LFB assay was successfully established and optimized at 64 °C for reaction of 40 min. The detection limit was determined as 10 fg/reaction of pure DNA, and no cross-reactions to non-B. pertussis strains were observed, based on the specificity validation. The whole operation, ranging from template preparation to result reporting, could be completed within 70 min without requirement of costly equipment. The B. pertussis-MCDA-LFB in clinic sample detection yielded identical positive rates with traditional culture and showed higher sensitivity than conventional PCR. The results of MCDA-LFB are easier to read due to the usage of LFB. CONCLUSIONS: The isothermal amplification based MCDA-LFB established in the present study is a specific, sensitive, rapid and economical technique for the detection of B. pertussis.
format Online
Article
Text
id pubmed-7444059
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-74440592020-08-26 Establishment and application of a multiple cross displacement amplification combined with nanoparticles-based biosensor method for the detection of Bordetella pertussis Li, Shijun Liu, Chunting Liu, Ying Ma, Qing Wang, Yue Wang, Yi BMC Microbiol Research Article BACKGROUND: Bordetella pertussis is the causative agent of pertussis, a respiratory tract infectious disease. Efficient techniques for detection of B. pertussis isolates are important for clinical diagnosis. Multiple cross displacement amplification (MCDA), a novel isothermal amplification based molecular detection method, has been developed to overcome the technical drawback of the current methods in recent years. This aim of this study is to develop a MCDA with Nanoparticles-based Lateral Flow Biosensor (MCDA-LFB) for the detection of B. pertussis. RESULTS: A set of 10 primers based on the pertussis toxin (PT) promoter region sequence of B. pertussis was designed. The B. pertussis-MCDA-LFB assay was successfully established and optimized at 64 °C for reaction of 40 min. The detection limit was determined as 10 fg/reaction of pure DNA, and no cross-reactions to non-B. pertussis strains were observed, based on the specificity validation. The whole operation, ranging from template preparation to result reporting, could be completed within 70 min without requirement of costly equipment. The B. pertussis-MCDA-LFB in clinic sample detection yielded identical positive rates with traditional culture and showed higher sensitivity than conventional PCR. The results of MCDA-LFB are easier to read due to the usage of LFB. CONCLUSIONS: The isothermal amplification based MCDA-LFB established in the present study is a specific, sensitive, rapid and economical technique for the detection of B. pertussis. BioMed Central 2020-08-24 /pmc/articles/PMC7444059/ /pubmed/32831029 http://dx.doi.org/10.1186/s12866-020-01945-x Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Article
Li, Shijun
Liu, Chunting
Liu, Ying
Ma, Qing
Wang, Yue
Wang, Yi
Establishment and application of a multiple cross displacement amplification combined with nanoparticles-based biosensor method for the detection of Bordetella pertussis
title Establishment and application of a multiple cross displacement amplification combined with nanoparticles-based biosensor method for the detection of Bordetella pertussis
title_full Establishment and application of a multiple cross displacement amplification combined with nanoparticles-based biosensor method for the detection of Bordetella pertussis
title_fullStr Establishment and application of a multiple cross displacement amplification combined with nanoparticles-based biosensor method for the detection of Bordetella pertussis
title_full_unstemmed Establishment and application of a multiple cross displacement amplification combined with nanoparticles-based biosensor method for the detection of Bordetella pertussis
title_short Establishment and application of a multiple cross displacement amplification combined with nanoparticles-based biosensor method for the detection of Bordetella pertussis
title_sort establishment and application of a multiple cross displacement amplification combined with nanoparticles-based biosensor method for the detection of bordetella pertussis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7444059/
https://www.ncbi.nlm.nih.gov/pubmed/32831029
http://dx.doi.org/10.1186/s12866-020-01945-x
work_keys_str_mv AT lishijun establishmentandapplicationofamultiplecrossdisplacementamplificationcombinedwithnanoparticlesbasedbiosensormethodforthedetectionofbordetellapertussis
AT liuchunting establishmentandapplicationofamultiplecrossdisplacementamplificationcombinedwithnanoparticlesbasedbiosensormethodforthedetectionofbordetellapertussis
AT liuying establishmentandapplicationofamultiplecrossdisplacementamplificationcombinedwithnanoparticlesbasedbiosensormethodforthedetectionofbordetellapertussis
AT maqing establishmentandapplicationofamultiplecrossdisplacementamplificationcombinedwithnanoparticlesbasedbiosensormethodforthedetectionofbordetellapertussis
AT wangyue establishmentandapplicationofamultiplecrossdisplacementamplificationcombinedwithnanoparticlesbasedbiosensormethodforthedetectionofbordetellapertussis
AT wangyi establishmentandapplicationofamultiplecrossdisplacementamplificationcombinedwithnanoparticlesbasedbiosensormethodforthedetectionofbordetellapertussis