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Real-World Outcomes of an Automated Physician Support System for Genome-Driven Oncology

PURPOSE: Matching patients to investigational therapies requires new tools to support physician decision making. We designed and implemented Precision Insight Support Engine (PRECISE), an automated, just-in-time, clinical-grade informatics platform to identify and dynamically track patients on the b...

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Autores principales: Tao, Jessica J., Eubank, Michael H., Schram, Alison M., Cangemi, Nicholas, Pamer, Erika, Rosen, Ezra Y., Schultz, Nikolaus, Chakravarty, Debyani, Philip, John, Hechtman, Jaclyn F., Harding, James J., Smyth, Lillian M., Jhaveri, Komal L., Drilon, Alexander, Ladanyi, Marc, Solit, David B., Zehir, Ahmet, Berger, Michael F., Stetson, Peter D., Gardos, Stuart M., Hyman, David M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society of Clinical Oncology 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7446398/
https://www.ncbi.nlm.nih.gov/pubmed/32914018
http://dx.doi.org/10.1200/PO.19.00066
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author Tao, Jessica J.
Eubank, Michael H.
Schram, Alison M.
Cangemi, Nicholas
Pamer, Erika
Rosen, Ezra Y.
Schultz, Nikolaus
Chakravarty, Debyani
Philip, John
Hechtman, Jaclyn F.
Harding, James J.
Smyth, Lillian M.
Jhaveri, Komal L.
Drilon, Alexander
Ladanyi, Marc
Solit, David B.
Zehir, Ahmet
Berger, Michael F.
Stetson, Peter D.
Gardos, Stuart M.
Hyman, David M.
author_facet Tao, Jessica J.
Eubank, Michael H.
Schram, Alison M.
Cangemi, Nicholas
Pamer, Erika
Rosen, Ezra Y.
Schultz, Nikolaus
Chakravarty, Debyani
Philip, John
Hechtman, Jaclyn F.
Harding, James J.
Smyth, Lillian M.
Jhaveri, Komal L.
Drilon, Alexander
Ladanyi, Marc
Solit, David B.
Zehir, Ahmet
Berger, Michael F.
Stetson, Peter D.
Gardos, Stuart M.
Hyman, David M.
author_sort Tao, Jessica J.
collection PubMed
description PURPOSE: Matching patients to investigational therapies requires new tools to support physician decision making. We designed and implemented Precision Insight Support Engine (PRECISE), an automated, just-in-time, clinical-grade informatics platform to identify and dynamically track patients on the basis of molecular and clinical criteria. Real-world use of this tool was analyzed to determine whether PRECISE facilitated enrollment to early-phase, genome-driven trials. MATERIALS AND METHODS: We analyzed patients who were enrolled in genome-driven, early-phase trials using PRECISE at Memorial Sloan Kettering Cancer Center between April 2014 and January 2018. Primary end point was the proportion of enrolled patients who were successfully identified using PRECISE before enrollment. Secondary end points included time from sequencing and PRECISE identification to enrollment. Reasons for a failure to identify genomically matched patients were also explored. RESULTS: Data were analyzed from 41 therapeutic trials led by 19 principal investigators. In total, 755 patients were accrued to these studies during the period that PRECISE was used. PRECISE successfully identified 327 patients (43%) before enrollment. Patients were diagnosed with 29 tumor types and harbored alterations in 43 oncogenes, most commonly ERBB2 (21.3%), PIK3CA (14.1%), and BRAF (8.7%). Median time from sequencing to enrollment was 163 days (interquartile range, 66 to 357 days), and from PRECISE identification to enrollment 87 days (interquartile range, 37 to 180 days). Common reasons for failing to identify patients before enrollment included accrual on the basis of molecular alterations that did not match pre-established PRECISE genomic eligibility (140 [33%] of 428) and external sequencing not available for parsing (127 [30%] of 428). CONCLUSION: PRECISE identified 43% of all patients accrued to a diverse cohort of early-phase, genome-matched studies. Purpose-built informatics platforms represent a novel and potentially effective method for matching patients to molecularly selected studies.
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spelling pubmed-74463982020-09-09 Real-World Outcomes of an Automated Physician Support System for Genome-Driven Oncology Tao, Jessica J. Eubank, Michael H. Schram, Alison M. Cangemi, Nicholas Pamer, Erika Rosen, Ezra Y. Schultz, Nikolaus Chakravarty, Debyani Philip, John Hechtman, Jaclyn F. Harding, James J. Smyth, Lillian M. Jhaveri, Komal L. Drilon, Alexander Ladanyi, Marc Solit, David B. Zehir, Ahmet Berger, Michael F. Stetson, Peter D. Gardos, Stuart M. Hyman, David M. JCO Precis Oncol Original Report PURPOSE: Matching patients to investigational therapies requires new tools to support physician decision making. We designed and implemented Precision Insight Support Engine (PRECISE), an automated, just-in-time, clinical-grade informatics platform to identify and dynamically track patients on the basis of molecular and clinical criteria. Real-world use of this tool was analyzed to determine whether PRECISE facilitated enrollment to early-phase, genome-driven trials. MATERIALS AND METHODS: We analyzed patients who were enrolled in genome-driven, early-phase trials using PRECISE at Memorial Sloan Kettering Cancer Center between April 2014 and January 2018. Primary end point was the proportion of enrolled patients who were successfully identified using PRECISE before enrollment. Secondary end points included time from sequencing and PRECISE identification to enrollment. Reasons for a failure to identify genomically matched patients were also explored. RESULTS: Data were analyzed from 41 therapeutic trials led by 19 principal investigators. In total, 755 patients were accrued to these studies during the period that PRECISE was used. PRECISE successfully identified 327 patients (43%) before enrollment. Patients were diagnosed with 29 tumor types and harbored alterations in 43 oncogenes, most commonly ERBB2 (21.3%), PIK3CA (14.1%), and BRAF (8.7%). Median time from sequencing to enrollment was 163 days (interquartile range, 66 to 357 days), and from PRECISE identification to enrollment 87 days (interquartile range, 37 to 180 days). Common reasons for failing to identify patients before enrollment included accrual on the basis of molecular alterations that did not match pre-established PRECISE genomic eligibility (140 [33%] of 428) and external sequencing not available for parsing (127 [30%] of 428). CONCLUSION: PRECISE identified 43% of all patients accrued to a diverse cohort of early-phase, genome-matched studies. Purpose-built informatics platforms represent a novel and potentially effective method for matching patients to molecularly selected studies. American Society of Clinical Oncology 2019-07-24 /pmc/articles/PMC7446398/ /pubmed/32914018 http://dx.doi.org/10.1200/PO.19.00066 Text en © 2019 by American Society of Clinical Oncology https://creativecommons.org/licenses/by/4.0/ Licensed under the Creative Commons Attribution 4.0 License: https://creativecommons.org/licenses/by/4.0/
spellingShingle Original Report
Tao, Jessica J.
Eubank, Michael H.
Schram, Alison M.
Cangemi, Nicholas
Pamer, Erika
Rosen, Ezra Y.
Schultz, Nikolaus
Chakravarty, Debyani
Philip, John
Hechtman, Jaclyn F.
Harding, James J.
Smyth, Lillian M.
Jhaveri, Komal L.
Drilon, Alexander
Ladanyi, Marc
Solit, David B.
Zehir, Ahmet
Berger, Michael F.
Stetson, Peter D.
Gardos, Stuart M.
Hyman, David M.
Real-World Outcomes of an Automated Physician Support System for Genome-Driven Oncology
title Real-World Outcomes of an Automated Physician Support System for Genome-Driven Oncology
title_full Real-World Outcomes of an Automated Physician Support System for Genome-Driven Oncology
title_fullStr Real-World Outcomes of an Automated Physician Support System for Genome-Driven Oncology
title_full_unstemmed Real-World Outcomes of an Automated Physician Support System for Genome-Driven Oncology
title_short Real-World Outcomes of an Automated Physician Support System for Genome-Driven Oncology
title_sort real-world outcomes of an automated physician support system for genome-driven oncology
topic Original Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7446398/
https://www.ncbi.nlm.nih.gov/pubmed/32914018
http://dx.doi.org/10.1200/PO.19.00066
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