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Evaluation of the FecalSwab for Stool Specimen Storage and Molecular Detection of Enteropathogens on the BD Max System

The FecalSwab system (Copan Italia, Brescia, Italy) is a convenient alternative to bulk stool for the diagnosis of enteric pathogens. Although the U.S. Food and Drug Administration (FDA) approved for transport and culture of enteric bacterial pathogens, the FecalSwab has not been well assessed for i...

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Autores principales: Richard-Greenblatt, Melissa, Rutherford, Candy, Luinstra, Kathy, Cárdenas, Ana María, Pang, Xiaoli Lilly, Jayaratne, Padman, Smieja, Marek
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7448620/
https://www.ncbi.nlm.nih.gov/pubmed/32461284
http://dx.doi.org/10.1128/JCM.00178-20
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author Richard-Greenblatt, Melissa
Rutherford, Candy
Luinstra, Kathy
Cárdenas, Ana María
Pang, Xiaoli Lilly
Jayaratne, Padman
Smieja, Marek
author_facet Richard-Greenblatt, Melissa
Rutherford, Candy
Luinstra, Kathy
Cárdenas, Ana María
Pang, Xiaoli Lilly
Jayaratne, Padman
Smieja, Marek
author_sort Richard-Greenblatt, Melissa
collection PubMed
description The FecalSwab system (Copan Italia, Brescia, Italy) is a convenient alternative to bulk stool for the diagnosis of enteric pathogens. Although the U.S. Food and Drug Administration (FDA) approved for transport and culture of enteric bacterial pathogens, the FecalSwab has not been well assessed for its suitability with molecular platforms. In this study, we evaluated the FecalSwab as a specimen type for the BD Max system using the viral and bacterial enteric panels (BD Diagnostics, Baltimore, MD, USA). A total of 186 unpreserved stool specimens were collected and used to prepare matched bulk stool and FecalSwab samples. Performance was equivalent (P > 0.48) to bulk stool for all targets when 50 μl of FecalSwab specimen was loaded onto the BD Max assays. As stool specimens are often collected off-site from the clinical microbiology laboratory and require transport, we assessed the stability of stool specimens stored for up to 14 days at 4°C, 22°C, or 35°C to account for varying transportation conditions. Molecular detection for the majority of viral targets (excluding astrovirus) was unaffected (change in cycle threshold [ΔC(T)] ≤ 1) by sample storage temperature over the 2-week period; however, detection of enteric bacteria was variable if specimens were not refrigerated (22°C or 35°C). By demonstrating equivalent performance to matched bulk stool and maintaining molecular detection sensitivity when stored at 4°C, we suggest that the FecalSwab is a suitable specimen type for enteropathogen diagnostics on the BD Max system.
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spelling pubmed-74486202020-09-09 Evaluation of the FecalSwab for Stool Specimen Storage and Molecular Detection of Enteropathogens on the BD Max System Richard-Greenblatt, Melissa Rutherford, Candy Luinstra, Kathy Cárdenas, Ana María Pang, Xiaoli Lilly Jayaratne, Padman Smieja, Marek J Clin Microbiol Virology The FecalSwab system (Copan Italia, Brescia, Italy) is a convenient alternative to bulk stool for the diagnosis of enteric pathogens. Although the U.S. Food and Drug Administration (FDA) approved for transport and culture of enteric bacterial pathogens, the FecalSwab has not been well assessed for its suitability with molecular platforms. In this study, we evaluated the FecalSwab as a specimen type for the BD Max system using the viral and bacterial enteric panels (BD Diagnostics, Baltimore, MD, USA). A total of 186 unpreserved stool specimens were collected and used to prepare matched bulk stool and FecalSwab samples. Performance was equivalent (P > 0.48) to bulk stool for all targets when 50 μl of FecalSwab specimen was loaded onto the BD Max assays. As stool specimens are often collected off-site from the clinical microbiology laboratory and require transport, we assessed the stability of stool specimens stored for up to 14 days at 4°C, 22°C, or 35°C to account for varying transportation conditions. Molecular detection for the majority of viral targets (excluding astrovirus) was unaffected (change in cycle threshold [ΔC(T)] ≤ 1) by sample storage temperature over the 2-week period; however, detection of enteric bacteria was variable if specimens were not refrigerated (22°C or 35°C). By demonstrating equivalent performance to matched bulk stool and maintaining molecular detection sensitivity when stored at 4°C, we suggest that the FecalSwab is a suitable specimen type for enteropathogen diagnostics on the BD Max system. American Society for Microbiology 2020-08-24 /pmc/articles/PMC7448620/ /pubmed/32461284 http://dx.doi.org/10.1128/JCM.00178-20 Text en Copyright © 2020 Richard-Greenblatt et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Virology
Richard-Greenblatt, Melissa
Rutherford, Candy
Luinstra, Kathy
Cárdenas, Ana María
Pang, Xiaoli Lilly
Jayaratne, Padman
Smieja, Marek
Evaluation of the FecalSwab for Stool Specimen Storage and Molecular Detection of Enteropathogens on the BD Max System
title Evaluation of the FecalSwab for Stool Specimen Storage and Molecular Detection of Enteropathogens on the BD Max System
title_full Evaluation of the FecalSwab for Stool Specimen Storage and Molecular Detection of Enteropathogens on the BD Max System
title_fullStr Evaluation of the FecalSwab for Stool Specimen Storage and Molecular Detection of Enteropathogens on the BD Max System
title_full_unstemmed Evaluation of the FecalSwab for Stool Specimen Storage and Molecular Detection of Enteropathogens on the BD Max System
title_short Evaluation of the FecalSwab for Stool Specimen Storage and Molecular Detection of Enteropathogens on the BD Max System
title_sort evaluation of the fecalswab for stool specimen storage and molecular detection of enteropathogens on the bd max system
topic Virology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7448620/
https://www.ncbi.nlm.nih.gov/pubmed/32461284
http://dx.doi.org/10.1128/JCM.00178-20
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