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Efficient numerical computation of the basic reproduction number for structured populations
As widely known, the basic reproduction number plays a key role in weighing birth/infection and death/recovery processes in several models of population dynamics. In this general setting, its characterization as the spectral radius of next generation operators is rather elegant, but simultaneously p...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier B.V.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7449967/ https://www.ncbi.nlm.nih.gov/pubmed/32868963 http://dx.doi.org/10.1016/j.cam.2020.113165 |
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author | Breda, Dimitri Florian, Francesco Ripoll, Jordi Vermiglio, Rossana |
author_facet | Breda, Dimitri Florian, Francesco Ripoll, Jordi Vermiglio, Rossana |
author_sort | Breda, Dimitri |
collection | PubMed |
description | As widely known, the basic reproduction number plays a key role in weighing birth/infection and death/recovery processes in several models of population dynamics. In this general setting, its characterization as the spectral radius of next generation operators is rather elegant, but simultaneously poses serious obstacles to its practical determination. In this work we address the problem numerically by reducing the relevant operators to matrices through a pseudospectral collocation, eventually computing the sought quantity by solving finite-dimensional eigenvalue problems. The approach is illustrated for two classes of models, respectively from ecology and epidemiology. Several numerical tests demonstrate experimentally important features of the method, like fast convergence and influence of the smoothness of the models’ coefficients. Examples of robust analysis of instances of specific models are also presented to show potentialities and ease of application. |
format | Online Article Text |
id | pubmed-7449967 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier B.V. |
record_format | MEDLINE/PubMed |
spelling | pubmed-74499672020-08-27 Efficient numerical computation of the basic reproduction number for structured populations Breda, Dimitri Florian, Francesco Ripoll, Jordi Vermiglio, Rossana J Comput Appl Math Article As widely known, the basic reproduction number plays a key role in weighing birth/infection and death/recovery processes in several models of population dynamics. In this general setting, its characterization as the spectral radius of next generation operators is rather elegant, but simultaneously poses serious obstacles to its practical determination. In this work we address the problem numerically by reducing the relevant operators to matrices through a pseudospectral collocation, eventually computing the sought quantity by solving finite-dimensional eigenvalue problems. The approach is illustrated for two classes of models, respectively from ecology and epidemiology. Several numerical tests demonstrate experimentally important features of the method, like fast convergence and influence of the smoothness of the models’ coefficients. Examples of robust analysis of instances of specific models are also presented to show potentialities and ease of application. Elsevier B.V. 2021-03-01 2020-08-27 /pmc/articles/PMC7449967/ /pubmed/32868963 http://dx.doi.org/10.1016/j.cam.2020.113165 Text en © 2020 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Breda, Dimitri Florian, Francesco Ripoll, Jordi Vermiglio, Rossana Efficient numerical computation of the basic reproduction number for structured populations |
title | Efficient numerical computation of the basic reproduction number for structured populations |
title_full | Efficient numerical computation of the basic reproduction number for structured populations |
title_fullStr | Efficient numerical computation of the basic reproduction number for structured populations |
title_full_unstemmed | Efficient numerical computation of the basic reproduction number for structured populations |
title_short | Efficient numerical computation of the basic reproduction number for structured populations |
title_sort | efficient numerical computation of the basic reproduction number for structured populations |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7449967/ https://www.ncbi.nlm.nih.gov/pubmed/32868963 http://dx.doi.org/10.1016/j.cam.2020.113165 |
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