African swine fever whole-genome sequencing—Quantity wanted but quality needed

The pandemic spread of African swine fever virus (ASFV) genotype II (GTII) has led to a global crisis. Since the circulating strains are almost identical, time and money have been mis-invested in whole-genome sequencing the last years. New methods, harmonised protocols for sample selection, sequenci...

Descripción completa

Detalles Bibliográficos
Autores principales: Forth, Jan H., Forth, Leonie F., Blome, Sandra, Höper, Dirk, Beer, Martin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Opinion
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7451517/
https://www.ncbi.nlm.nih.gov/pubmed/32853289
http://dx.doi.org/10.1371/journal.ppat.1008779
_version_ 1783574993895948288
author Forth, Jan H.
Forth, Leonie F.
Blome, Sandra
Höper, Dirk
Beer, Martin
author_facet Forth, Jan H.
Forth, Leonie F.
Blome, Sandra
Höper, Dirk
Beer, Martin
author_sort Forth, Jan H.
collection PubMed
description The pandemic spread of African swine fever virus (ASFV) genotype II (GTII) has led to a global crisis. Since the circulating strains are almost identical, time and money have been mis-invested in whole-genome sequencing the last years. New methods, harmonised protocols for sample selection, sequencing, and bioinformatics are therefore urgently needed.
format Online
Article
Text
id pubmed-7451517
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-74515172020-09-02 African swine fever whole-genome sequencing—Quantity wanted but quality needed Forth, Jan H. Forth, Leonie F. Blome, Sandra Höper, Dirk Beer, Martin PLoS Pathog Opinion The pandemic spread of African swine fever virus (ASFV) genotype II (GTII) has led to a global crisis. Since the circulating strains are almost identical, time and money have been mis-invested in whole-genome sequencing the last years. New methods, harmonised protocols for sample selection, sequencing, and bioinformatics are therefore urgently needed. Public Library of Science 2020-08-27 /pmc/articles/PMC7451517/ /pubmed/32853289 http://dx.doi.org/10.1371/journal.ppat.1008779 Text en © 2020 Forth et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Opinion
Forth, Jan H.
Forth, Leonie F.
Blome, Sandra
Höper, Dirk
Beer, Martin
African swine fever whole-genome sequencing—Quantity wanted but quality needed
title African swine fever whole-genome sequencing—Quantity wanted but quality needed
title_full African swine fever whole-genome sequencing—Quantity wanted but quality needed
title_fullStr African swine fever whole-genome sequencing—Quantity wanted but quality needed
title_full_unstemmed African swine fever whole-genome sequencing—Quantity wanted but quality needed
title_short African swine fever whole-genome sequencing—Quantity wanted but quality needed
title_sort african swine fever whole-genome sequencing—quantity wanted but quality needed
topic Opinion
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7451517/
https://www.ncbi.nlm.nih.gov/pubmed/32853289
http://dx.doi.org/10.1371/journal.ppat.1008779
work_keys_str_mv AT forthjanh africanswinefeverwholegenomesequencingquantitywantedbutqualityneeded
AT forthleonief africanswinefeverwholegenomesequencingquantitywantedbutqualityneeded
AT blomesandra africanswinefeverwholegenomesequencingquantitywantedbutqualityneeded
AT hoperdirk africanswinefeverwholegenomesequencingquantitywantedbutqualityneeded
AT beermartin africanswinefeverwholegenomesequencingquantitywantedbutqualityneeded

Ejemplares similares