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Predicting and analyzing the COVID-19 epidemic in China: Based on SEIRD, LSTM and GWR models

In December 2019, the novel coronavirus pneumonia (COVID-19) occurred in Wuhan, Hubei Province, China. The epidemic quickly broke out and spread throughout the country. Now it becomes a pandemic that affects the whole world. In this study, three models were used to fit and predict the epidemic situa...

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Autores principales: Liu, Fenglin, Wang, Jie, Liu, Jiawen, Li, Yue, Liu, Dagong, Tong, Junliang, Li, Zhuoqun, Yu, Dan, Fan, Yifan, Bi, Xiaohui, Zhang, Xueting, Mo, Steven
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7451659/
https://www.ncbi.nlm.nih.gov/pubmed/32853285
http://dx.doi.org/10.1371/journal.pone.0238280
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author Liu, Fenglin
Wang, Jie
Liu, Jiawen
Li, Yue
Liu, Dagong
Tong, Junliang
Li, Zhuoqun
Yu, Dan
Fan, Yifan
Bi, Xiaohui
Zhang, Xueting
Mo, Steven
author_facet Liu, Fenglin
Wang, Jie
Liu, Jiawen
Li, Yue
Liu, Dagong
Tong, Junliang
Li, Zhuoqun
Yu, Dan
Fan, Yifan
Bi, Xiaohui
Zhang, Xueting
Mo, Steven
author_sort Liu, Fenglin
collection PubMed
description In December 2019, the novel coronavirus pneumonia (COVID-19) occurred in Wuhan, Hubei Province, China. The epidemic quickly broke out and spread throughout the country. Now it becomes a pandemic that affects the whole world. In this study, three models were used to fit and predict the epidemic situation in China: a modified SEIRD (Susceptible-Exposed-Infected-Recovered-Dead) dynamic model, a neural network method LSTM (Long Short-Term Memory), and a GWR (Geographically Weighted Regression) model reflecting spatial heterogeneity. Overall, all the three models performed well with great accuracy. The dynamic SEIRD prediction APE (absolute percent error) of China had been ≤ 1.0% since Mid-February. The LSTM model showed comparable accuracy. The GWR model took into account the influence of geographical differences, with R(2) = 99.98% in fitting and 97.95% in prediction. Wilcoxon test showed that none of the three models outperformed the other two at the significance level of 0.05. The parametric analysis of the infectious rate and recovery rate demonstrated that China's national policies had effectively slowed down the spread of the epidemic. Furthermore, the models in this study provided a wide range of implications for other countries to predict the short-term and long-term trend of COVID-19, and to evaluate the intensity and effect of their interventions.
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spelling pubmed-74516592020-09-02 Predicting and analyzing the COVID-19 epidemic in China: Based on SEIRD, LSTM and GWR models Liu, Fenglin Wang, Jie Liu, Jiawen Li, Yue Liu, Dagong Tong, Junliang Li, Zhuoqun Yu, Dan Fan, Yifan Bi, Xiaohui Zhang, Xueting Mo, Steven PLoS One Research Article In December 2019, the novel coronavirus pneumonia (COVID-19) occurred in Wuhan, Hubei Province, China. The epidemic quickly broke out and spread throughout the country. Now it becomes a pandemic that affects the whole world. In this study, three models were used to fit and predict the epidemic situation in China: a modified SEIRD (Susceptible-Exposed-Infected-Recovered-Dead) dynamic model, a neural network method LSTM (Long Short-Term Memory), and a GWR (Geographically Weighted Regression) model reflecting spatial heterogeneity. Overall, all the three models performed well with great accuracy. The dynamic SEIRD prediction APE (absolute percent error) of China had been ≤ 1.0% since Mid-February. The LSTM model showed comparable accuracy. The GWR model took into account the influence of geographical differences, with R(2) = 99.98% in fitting and 97.95% in prediction. Wilcoxon test showed that none of the three models outperformed the other two at the significance level of 0.05. The parametric analysis of the infectious rate and recovery rate demonstrated that China's national policies had effectively slowed down the spread of the epidemic. Furthermore, the models in this study provided a wide range of implications for other countries to predict the short-term and long-term trend of COVID-19, and to evaluate the intensity and effect of their interventions. Public Library of Science 2020-08-27 /pmc/articles/PMC7451659/ /pubmed/32853285 http://dx.doi.org/10.1371/journal.pone.0238280 Text en © 2020 Liu et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Liu, Fenglin
Wang, Jie
Liu, Jiawen
Li, Yue
Liu, Dagong
Tong, Junliang
Li, Zhuoqun
Yu, Dan
Fan, Yifan
Bi, Xiaohui
Zhang, Xueting
Mo, Steven
Predicting and analyzing the COVID-19 epidemic in China: Based on SEIRD, LSTM and GWR models
title Predicting and analyzing the COVID-19 epidemic in China: Based on SEIRD, LSTM and GWR models
title_full Predicting and analyzing the COVID-19 epidemic in China: Based on SEIRD, LSTM and GWR models
title_fullStr Predicting and analyzing the COVID-19 epidemic in China: Based on SEIRD, LSTM and GWR models
title_full_unstemmed Predicting and analyzing the COVID-19 epidemic in China: Based on SEIRD, LSTM and GWR models
title_short Predicting and analyzing the COVID-19 epidemic in China: Based on SEIRD, LSTM and GWR models
title_sort predicting and analyzing the covid-19 epidemic in china: based on seird, lstm and gwr models
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7451659/
https://www.ncbi.nlm.nih.gov/pubmed/32853285
http://dx.doi.org/10.1371/journal.pone.0238280
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