Cargando…

Differential proteomics analysis of serum exosomein burn patients

The exosome is an emerging concepts biomarkers due to their abnormal expression in various diseases. Research on exosome has already shifted from the laboratory to clinical application. This study uses bioinformatics technology to identify functional changes in proteins of serum exosomes from burn p...

Descripción completa

Detalles Bibliográficos
Autores principales: Qin, Danying, Yang, Wenxian, Pan, Zeping, Zhang, Yuheng, Li, Xueyong, Lakshmanan, Sivalingam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7451684/
https://www.ncbi.nlm.nih.gov/pubmed/32874118
http://dx.doi.org/10.1016/j.sjbs.2020.06.024
_version_ 1783575028448624640
author Qin, Danying
Yang, Wenxian
Pan, Zeping
Zhang, Yuheng
Li, Xueyong
Lakshmanan, Sivalingam
author_facet Qin, Danying
Yang, Wenxian
Pan, Zeping
Zhang, Yuheng
Li, Xueyong
Lakshmanan, Sivalingam
author_sort Qin, Danying
collection PubMed
description The exosome is an emerging concepts biomarkers due to their abnormal expression in various diseases. Research on exosome has already shifted from the laboratory to clinical application. This study uses bioinformatics technology to identify functional changes in proteins of serum exosomes from burn patients. A total of 231 quantifiable differentially-expressed proteins were screened out, 31 of them had statistically significant changes in expression levels. In the test group, expression of2 proteins had downregulated, whereas that of 29 proteins upregulated. Gene Ontology analysis demonstrates that differentially-expressed proteins were primarily identified in extracellular vesicles and platelet α granules, which can alter enzyme inhibitor activities, heparin-binding, coagulation, and lipid transport. Kyoto Encyclopedia of Genes and Genomes pathway analysis demonstrates that ITGA2B and ITGB3 proteins, which were significantly upregulated in the burn group, were primarily involved in the PI3K/AKT signaling pathway. Western blotting confirmed that the expressions of ITGA2B and ITGB3 in burn patient tissue samples were higher than those in the control group; conversely, the expression of CD9 was lower than that in the control group. In burn patients, the upregulated proteins ITGA2B and ITGB3 of serum exosomes likely participate in injury detection and repair via PI3K/AKT signaling pathways.
format Online
Article
Text
id pubmed-7451684
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-74516842020-08-31 Differential proteomics analysis of serum exosomein burn patients Qin, Danying Yang, Wenxian Pan, Zeping Zhang, Yuheng Li, Xueyong Lakshmanan, Sivalingam Saudi J Biol Sci Article The exosome is an emerging concepts biomarkers due to their abnormal expression in various diseases. Research on exosome has already shifted from the laboratory to clinical application. This study uses bioinformatics technology to identify functional changes in proteins of serum exosomes from burn patients. A total of 231 quantifiable differentially-expressed proteins were screened out, 31 of them had statistically significant changes in expression levels. In the test group, expression of2 proteins had downregulated, whereas that of 29 proteins upregulated. Gene Ontology analysis demonstrates that differentially-expressed proteins were primarily identified in extracellular vesicles and platelet α granules, which can alter enzyme inhibitor activities, heparin-binding, coagulation, and lipid transport. Kyoto Encyclopedia of Genes and Genomes pathway analysis demonstrates that ITGA2B and ITGB3 proteins, which were significantly upregulated in the burn group, were primarily involved in the PI3K/AKT signaling pathway. Western blotting confirmed that the expressions of ITGA2B and ITGB3 in burn patient tissue samples were higher than those in the control group; conversely, the expression of CD9 was lower than that in the control group. In burn patients, the upregulated proteins ITGA2B and ITGB3 of serum exosomes likely participate in injury detection and repair via PI3K/AKT signaling pathways. Elsevier 2020-09 2020-06-26 /pmc/articles/PMC7451684/ /pubmed/32874118 http://dx.doi.org/10.1016/j.sjbs.2020.06.024 Text en © 2020 The Author(s) http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Qin, Danying
Yang, Wenxian
Pan, Zeping
Zhang, Yuheng
Li, Xueyong
Lakshmanan, Sivalingam
Differential proteomics analysis of serum exosomein burn patients
title Differential proteomics analysis of serum exosomein burn patients
title_full Differential proteomics analysis of serum exosomein burn patients
title_fullStr Differential proteomics analysis of serum exosomein burn patients
title_full_unstemmed Differential proteomics analysis of serum exosomein burn patients
title_short Differential proteomics analysis of serum exosomein burn patients
title_sort differential proteomics analysis of serum exosomein burn patients
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7451684/
https://www.ncbi.nlm.nih.gov/pubmed/32874118
http://dx.doi.org/10.1016/j.sjbs.2020.06.024
work_keys_str_mv AT qindanying differentialproteomicsanalysisofserumexosomeinburnpatients
AT yangwenxian differentialproteomicsanalysisofserumexosomeinburnpatients
AT panzeping differentialproteomicsanalysisofserumexosomeinburnpatients
AT zhangyuheng differentialproteomicsanalysisofserumexosomeinburnpatients
AT lixueyong differentialproteomicsanalysisofserumexosomeinburnpatients
AT lakshmanansivalingam differentialproteomicsanalysisofserumexosomeinburnpatients