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Predicting PBT and CMR properties of substances of very high concern (SVHCs) using QSAR models, and application for K-REACH
Quantitative structure-activity relationship (QSAR) models have been applied to predict a variety of toxicity endpoints. Their performance needs to be validated, in a variety of cases, to increase their applicability to chemical regulation. Using the data set of substances of very high concern (SVHC...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7451722/ https://www.ncbi.nlm.nih.gov/pubmed/32874922 http://dx.doi.org/10.1016/j.toxrep.2020.08.014 |
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author | Moon, Joonsik Lee, Byongcheun Ra, Jin-Sung Kim, Ki-Tae |
author_facet | Moon, Joonsik Lee, Byongcheun Ra, Jin-Sung Kim, Ki-Tae |
author_sort | Moon, Joonsik |
collection | PubMed |
description | Quantitative structure-activity relationship (QSAR) models have been applied to predict a variety of toxicity endpoints. Their performance needs to be validated, in a variety of cases, to increase their applicability to chemical regulation. Using the data set of substances of very high concern (SVHCs), the performance of QSAR models were evaluated to predict the persistence and bioaccumulation of PBT, and the carcinogenicity and mutagenicity of CMR. BIOWIN and Toxtree showed higher sensitivity than other QSAR models – the former for persistence and bioaccumulation, the latter for carcinogenicity. In terms of mutagenicity, the sensitivities of QSAR models were underestimated, Toxtree was more accurate and specific than lazy structure–activity relationships (LAZARs) and Computer Assisted Evaluation of industrial chemical Substances According to Regulations (CAESAR). Using the weight of evidence (WoE) approach, which integrates results of individual QSAR models, enhanced the sensitivity of each toxicity endpoint. On the basis of obtained results, in particular the prediction of persistence and bioaccumulation by KOWWIN, a conservative criterion is recommended of log Kow greater than 4.5 in K-REACH, without an upper limit. This study suggests that reliable production of toxicity data by QSAR models is facilitated by a better understanding of the performance of these models. |
format | Online Article Text |
id | pubmed-7451722 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-74517222020-08-31 Predicting PBT and CMR properties of substances of very high concern (SVHCs) using QSAR models, and application for K-REACH Moon, Joonsik Lee, Byongcheun Ra, Jin-Sung Kim, Ki-Tae Toxicol Rep Regular Article Quantitative structure-activity relationship (QSAR) models have been applied to predict a variety of toxicity endpoints. Their performance needs to be validated, in a variety of cases, to increase their applicability to chemical regulation. Using the data set of substances of very high concern (SVHCs), the performance of QSAR models were evaluated to predict the persistence and bioaccumulation of PBT, and the carcinogenicity and mutagenicity of CMR. BIOWIN and Toxtree showed higher sensitivity than other QSAR models – the former for persistence and bioaccumulation, the latter for carcinogenicity. In terms of mutagenicity, the sensitivities of QSAR models were underestimated, Toxtree was more accurate and specific than lazy structure–activity relationships (LAZARs) and Computer Assisted Evaluation of industrial chemical Substances According to Regulations (CAESAR). Using the weight of evidence (WoE) approach, which integrates results of individual QSAR models, enhanced the sensitivity of each toxicity endpoint. On the basis of obtained results, in particular the prediction of persistence and bioaccumulation by KOWWIN, a conservative criterion is recommended of log Kow greater than 4.5 in K-REACH, without an upper limit. This study suggests that reliable production of toxicity data by QSAR models is facilitated by a better understanding of the performance of these models. Elsevier 2020-08-15 /pmc/articles/PMC7451722/ /pubmed/32874922 http://dx.doi.org/10.1016/j.toxrep.2020.08.014 Text en © 2020 The Authors. Published by Elsevier B.V. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Regular Article Moon, Joonsik Lee, Byongcheun Ra, Jin-Sung Kim, Ki-Tae Predicting PBT and CMR properties of substances of very high concern (SVHCs) using QSAR models, and application for K-REACH |
title | Predicting PBT and CMR properties of substances of very high concern (SVHCs) using QSAR models, and application for K-REACH |
title_full | Predicting PBT and CMR properties of substances of very high concern (SVHCs) using QSAR models, and application for K-REACH |
title_fullStr | Predicting PBT and CMR properties of substances of very high concern (SVHCs) using QSAR models, and application for K-REACH |
title_full_unstemmed | Predicting PBT and CMR properties of substances of very high concern (SVHCs) using QSAR models, and application for K-REACH |
title_short | Predicting PBT and CMR properties of substances of very high concern (SVHCs) using QSAR models, and application for K-REACH |
title_sort | predicting pbt and cmr properties of substances of very high concern (svhcs) using qsar models, and application for k-reach |
topic | Regular Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7451722/ https://www.ncbi.nlm.nih.gov/pubmed/32874922 http://dx.doi.org/10.1016/j.toxrep.2020.08.014 |
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