Cargando…

Transcriptome dataset from bark and latex tissues of three Hevea brasiliensis clones

Hevea brasiliensis is exploited for its latex production, and it is the only viable source of natural rubber worldwide. The demand for natural rubber remains high due its high-quality properties, which synthetic rubber cannot compete with. In this paper, we present transcriptomic data and analysis o...

Descripción completa

Detalles Bibliográficos
Autores principales: Abu Bakar, Mohd Fahmi, Kamerkar, Urwashi, Abdul Rahman, Siti Nurfazilah, Muhd Sakaff, Muhd Khairul Luqman, Othman, Ahmad Sofiman
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7452566/
https://www.ncbi.nlm.nih.gov/pubmed/32904357
http://dx.doi.org/10.1016/j.dib.2020.106188
Descripción
Sumario:Hevea brasiliensis is exploited for its latex production, and it is the only viable source of natural rubber worldwide. The demand for natural rubber remains high due its high-quality properties, which synthetic rubber cannot compete with. In this paper, we present transcriptomic data and analysis of three H. brasiliensis clones using tissue from latex and bark tissues collected from 10-year-old plant. The combined, assembled transcripts were mapped onto an H. brasiliensis draft genome. Gene ontology analysis showed that the most abundant transcripts related to molecular functions, followed by biological processes and cellular components. Simple sequence repeats (SSR) and single nucleotide polymorphisms (SNP) were also identified, and these can be useful for selection of parental and new clones in a breeding program. Data generated by RNA sequencing were deposited in the NCBI public repository under accession number PRJNA629890.