Cargando…

Easing diagnosis and pushing the detection limits of SARS-CoV-2

Rigorous testing is the way forward to fight the coronavirus disease 2019 pandemic. Here we show that the currently used and most reliable reverse transcription-polymerase chain reaction-based severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2) procedure can be further simplified to make it...

Descripción completa

Detalles Bibliográficos
Autores principales: Kiran, Uday, Gokulan, C G, Kuncha, Santosh Kumar, Vedagiri, Dhiviya, Chander, Bingi Thrilok, Sekhar, Aedula Vinaya, Dontamala, Suchitra, Reddy, Arakatla Lohith, Tallapaka, Karthik Bharadwaj, Mishra, Rakesh K, Harshan, Krishnan Harinivas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7454390/
https://www.ncbi.nlm.nih.gov/pubmed/33072873
http://dx.doi.org/10.1093/biomethods/bpaa017
_version_ 1783575494823772160
author Kiran, Uday
Gokulan, C G
Kuncha, Santosh Kumar
Vedagiri, Dhiviya
Chander, Bingi Thrilok
Sekhar, Aedula Vinaya
Dontamala, Suchitra
Reddy, Arakatla Lohith
Tallapaka, Karthik Bharadwaj
Mishra, Rakesh K
Harshan, Krishnan Harinivas
author_facet Kiran, Uday
Gokulan, C G
Kuncha, Santosh Kumar
Vedagiri, Dhiviya
Chander, Bingi Thrilok
Sekhar, Aedula Vinaya
Dontamala, Suchitra
Reddy, Arakatla Lohith
Tallapaka, Karthik Bharadwaj
Mishra, Rakesh K
Harshan, Krishnan Harinivas
author_sort Kiran, Uday
collection PubMed
description Rigorous testing is the way forward to fight the coronavirus disease 2019 pandemic. Here we show that the currently used and most reliable reverse transcription-polymerase chain reaction-based severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2) procedure can be further simplified to make it faster, safer, and economical by eliminating the RNA isolation step. The modified method is not only fast and convenient but also at par with the traditional method in terms of accuracy, and therefore can be used for mass screening. Our method takes about half the time and is cheaper by ∼40% compared to the currently used method. We also provide a variant of the new method that increases the efficiency of detection by ∼30% compared to the existing procedure. Taken together, we demonstrate a more effective and reliable method of SARS-CoV-2 detection.
format Online
Article
Text
id pubmed-7454390
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-74543902020-08-31 Easing diagnosis and pushing the detection limits of SARS-CoV-2 Kiran, Uday Gokulan, C G Kuncha, Santosh Kumar Vedagiri, Dhiviya Chander, Bingi Thrilok Sekhar, Aedula Vinaya Dontamala, Suchitra Reddy, Arakatla Lohith Tallapaka, Karthik Bharadwaj Mishra, Rakesh K Harshan, Krishnan Harinivas Biol Methods Protoc Innovations Rigorous testing is the way forward to fight the coronavirus disease 2019 pandemic. Here we show that the currently used and most reliable reverse transcription-polymerase chain reaction-based severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2) procedure can be further simplified to make it faster, safer, and economical by eliminating the RNA isolation step. The modified method is not only fast and convenient but also at par with the traditional method in terms of accuracy, and therefore can be used for mass screening. Our method takes about half the time and is cheaper by ∼40% compared to the currently used method. We also provide a variant of the new method that increases the efficiency of detection by ∼30% compared to the existing procedure. Taken together, we demonstrate a more effective and reliable method of SARS-CoV-2 detection. Oxford University Press 2020-08-20 /pmc/articles/PMC7454390/ /pubmed/33072873 http://dx.doi.org/10.1093/biomethods/bpaa017 Text en © The Author(s) 2020. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Innovations
Kiran, Uday
Gokulan, C G
Kuncha, Santosh Kumar
Vedagiri, Dhiviya
Chander, Bingi Thrilok
Sekhar, Aedula Vinaya
Dontamala, Suchitra
Reddy, Arakatla Lohith
Tallapaka, Karthik Bharadwaj
Mishra, Rakesh K
Harshan, Krishnan Harinivas
Easing diagnosis and pushing the detection limits of SARS-CoV-2
title Easing diagnosis and pushing the detection limits of SARS-CoV-2
title_full Easing diagnosis and pushing the detection limits of SARS-CoV-2
title_fullStr Easing diagnosis and pushing the detection limits of SARS-CoV-2
title_full_unstemmed Easing diagnosis and pushing the detection limits of SARS-CoV-2
title_short Easing diagnosis and pushing the detection limits of SARS-CoV-2
title_sort easing diagnosis and pushing the detection limits of sars-cov-2
topic Innovations
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7454390/
https://www.ncbi.nlm.nih.gov/pubmed/33072873
http://dx.doi.org/10.1093/biomethods/bpaa017
work_keys_str_mv AT kiranuday easingdiagnosisandpushingthedetectionlimitsofsarscov2
AT gokulancg easingdiagnosisandpushingthedetectionlimitsofsarscov2
AT kunchasantoshkumar easingdiagnosisandpushingthedetectionlimitsofsarscov2
AT vedagiridhiviya easingdiagnosisandpushingthedetectionlimitsofsarscov2
AT chanderbingithrilok easingdiagnosisandpushingthedetectionlimitsofsarscov2
AT sekharaedulavinaya easingdiagnosisandpushingthedetectionlimitsofsarscov2
AT dontamalasuchitra easingdiagnosisandpushingthedetectionlimitsofsarscov2
AT reddyarakatlalohith easingdiagnosisandpushingthedetectionlimitsofsarscov2
AT tallapakakarthikbharadwaj easingdiagnosisandpushingthedetectionlimitsofsarscov2
AT mishrarakeshk easingdiagnosisandpushingthedetectionlimitsofsarscov2
AT harshankrishnanharinivas easingdiagnosisandpushingthedetectionlimitsofsarscov2