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Prognostic Values for the mRNA Expression of the ADAMTS Family of Genes in Gastric Cancer
The “A Disintegrin and Metalloproteinase with Thrombospondin Motif” (ADAMTS) family of genes is involved in the occurrence and development of different cancers. However, the prognostic value of these genes in gastric cancer (GC) has not been revealed. The present study was thus conducted to determin...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Hindawi
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7455834/ https://www.ncbi.nlm.nih.gov/pubmed/32884571 http://dx.doi.org/10.1155/2020/9431560 |
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author | Liang, Liang Zhu, Jin-hui Chen, Gang Qin, Xin-gan Chen, Jun-qiang |
author_facet | Liang, Liang Zhu, Jin-hui Chen, Gang Qin, Xin-gan Chen, Jun-qiang |
author_sort | Liang, Liang |
collection | PubMed |
description | The “A Disintegrin and Metalloproteinase with Thrombospondin Motif” (ADAMTS) family of genes is involved in the occurrence and development of different cancers. However, the prognostic value of these genes in gastric cancer (GC) has not been revealed. The present study was thus conducted to determine the prognostic value for the ADAMTS family of genes in GC. First, we evaluated the mRNA expression levels of the ADAMTS family in GC patients using a GEPIA dataset. Thereafter, we determined the prognostic value of these genes by analyzing their mRNA level using the Kaplan–Meier Plotter database. The mRNA expression level of ADAMTS12 was randomly validated by qRT-PCR and meta-analysis while its coexpression genes were derived using Coexpedia. Finally, we performed Gene Ontology (GO) annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses using the OmicShare Tools. Compared to normal tissues, expression of ADAMTS2 and 12 was significantly higher while that of ADAMTS1, 13, and 15 was significantly lower in GC tissues. According to the RNA-seq and gene chip data, the ADAMTS family (6, 7, 12, 15, and 18) of genes was closely related to the prognosis of GC, and their high expression levels were associated with poor prognosis and survival time. In addition, ADAMTS12 was highly expressed in 20 pairs of GC tissues based on RT-PCR (P=0.016) and meta-analysis (SMD: 0.73, 95% CI: 0.32–1.14, P < 0.001). GO and KEGG pathway analyses indicated that the ADAMTS12 coexpressed genes were enriched in the pathways of extracellular matrix organization, extracellular matrix structural constituent, extracellular matrix, and protein digestion and absorption. Herein, we discovered the prognostic values and biological roles of the ADAMTS genes in GC. |
format | Online Article Text |
id | pubmed-7455834 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-74558342020-09-02 Prognostic Values for the mRNA Expression of the ADAMTS Family of Genes in Gastric Cancer Liang, Liang Zhu, Jin-hui Chen, Gang Qin, Xin-gan Chen, Jun-qiang J Oncol Research Article The “A Disintegrin and Metalloproteinase with Thrombospondin Motif” (ADAMTS) family of genes is involved in the occurrence and development of different cancers. However, the prognostic value of these genes in gastric cancer (GC) has not been revealed. The present study was thus conducted to determine the prognostic value for the ADAMTS family of genes in GC. First, we evaluated the mRNA expression levels of the ADAMTS family in GC patients using a GEPIA dataset. Thereafter, we determined the prognostic value of these genes by analyzing their mRNA level using the Kaplan–Meier Plotter database. The mRNA expression level of ADAMTS12 was randomly validated by qRT-PCR and meta-analysis while its coexpression genes were derived using Coexpedia. Finally, we performed Gene Ontology (GO) annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses using the OmicShare Tools. Compared to normal tissues, expression of ADAMTS2 and 12 was significantly higher while that of ADAMTS1, 13, and 15 was significantly lower in GC tissues. According to the RNA-seq and gene chip data, the ADAMTS family (6, 7, 12, 15, and 18) of genes was closely related to the prognosis of GC, and their high expression levels were associated with poor prognosis and survival time. In addition, ADAMTS12 was highly expressed in 20 pairs of GC tissues based on RT-PCR (P=0.016) and meta-analysis (SMD: 0.73, 95% CI: 0.32–1.14, P < 0.001). GO and KEGG pathway analyses indicated that the ADAMTS12 coexpressed genes were enriched in the pathways of extracellular matrix organization, extracellular matrix structural constituent, extracellular matrix, and protein digestion and absorption. Herein, we discovered the prognostic values and biological roles of the ADAMTS genes in GC. Hindawi 2020-08-20 /pmc/articles/PMC7455834/ /pubmed/32884571 http://dx.doi.org/10.1155/2020/9431560 Text en Copyright © 2020 Liang Liang et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Liang, Liang Zhu, Jin-hui Chen, Gang Qin, Xin-gan Chen, Jun-qiang Prognostic Values for the mRNA Expression of the ADAMTS Family of Genes in Gastric Cancer |
title | Prognostic Values for the mRNA Expression of the ADAMTS Family of Genes in Gastric Cancer |
title_full | Prognostic Values for the mRNA Expression of the ADAMTS Family of Genes in Gastric Cancer |
title_fullStr | Prognostic Values for the mRNA Expression of the ADAMTS Family of Genes in Gastric Cancer |
title_full_unstemmed | Prognostic Values for the mRNA Expression of the ADAMTS Family of Genes in Gastric Cancer |
title_short | Prognostic Values for the mRNA Expression of the ADAMTS Family of Genes in Gastric Cancer |
title_sort | prognostic values for the mrna expression of the adamts family of genes in gastric cancer |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7455834/ https://www.ncbi.nlm.nih.gov/pubmed/32884571 http://dx.doi.org/10.1155/2020/9431560 |
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