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Association analysis between chronic obstructive pulmonary disease and polymorphisms in circadian genes

BACKGROUND: Circadian genes have been suggested to play an important role in lung pathology. However, it remains unknown whether polymorphisms of these genes are associated with chronic obstructive pulmonary disease (COPD). Here, we aimed to investigate the association of circadian genes polymorphis...

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Autores principales: Chen, Guo, Zhang, Jingwei, Zhang, Lijuan, Xiong, Xuan, Yu, Dongke, Zhang, Yuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7456532/
https://www.ncbi.nlm.nih.gov/pubmed/32913680
http://dx.doi.org/10.7717/peerj.9806
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author Chen, Guo
Zhang, Jingwei
Zhang, Lijuan
Xiong, Xuan
Yu, Dongke
Zhang, Yuan
author_facet Chen, Guo
Zhang, Jingwei
Zhang, Lijuan
Xiong, Xuan
Yu, Dongke
Zhang, Yuan
author_sort Chen, Guo
collection PubMed
description BACKGROUND: Circadian genes have been suggested to play an important role in lung pathology. However, it remains unknown whether polymorphisms of these genes are associated with chronic obstructive pulmonary disease (COPD). Here, we aimed to investigate the association of circadian genes polymorphisms with COPD in a case-control study of 477 COPD patient and 323 control Han Chinese persons. METHODS: Genotyping assays were carried out for nine single nucleotide polymorphisms (SNPs) from five circadian genes (PER3, CLOCK, RORB, BMAL1 and CRY2) that were previously identified in lung pathology. Age, sex, BMI and smoking status and comorbidities were recorded for all subjects. RESULTS: No significant association was found in all SNP sites in overall subjects and no significant difference was found in age, sex, smoking status stratification analysis. DISCUSSION: The findings of this investigation indicated the effect of circadian genes polymorphisms on COPD susceptibility may only be small and possibly dependent on the subject factors, such as age and sex.
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spelling pubmed-74565322020-09-09 Association analysis between chronic obstructive pulmonary disease and polymorphisms in circadian genes Chen, Guo Zhang, Jingwei Zhang, Lijuan Xiong, Xuan Yu, Dongke Zhang, Yuan PeerJ Geriatrics BACKGROUND: Circadian genes have been suggested to play an important role in lung pathology. However, it remains unknown whether polymorphisms of these genes are associated with chronic obstructive pulmonary disease (COPD). Here, we aimed to investigate the association of circadian genes polymorphisms with COPD in a case-control study of 477 COPD patient and 323 control Han Chinese persons. METHODS: Genotyping assays were carried out for nine single nucleotide polymorphisms (SNPs) from five circadian genes (PER3, CLOCK, RORB, BMAL1 and CRY2) that were previously identified in lung pathology. Age, sex, BMI and smoking status and comorbidities were recorded for all subjects. RESULTS: No significant association was found in all SNP sites in overall subjects and no significant difference was found in age, sex, smoking status stratification analysis. DISCUSSION: The findings of this investigation indicated the effect of circadian genes polymorphisms on COPD susceptibility may only be small and possibly dependent on the subject factors, such as age and sex. PeerJ Inc. 2020-08-27 /pmc/articles/PMC7456532/ /pubmed/32913680 http://dx.doi.org/10.7717/peerj.9806 Text en © 2020 Chen et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Geriatrics
Chen, Guo
Zhang, Jingwei
Zhang, Lijuan
Xiong, Xuan
Yu, Dongke
Zhang, Yuan
Association analysis between chronic obstructive pulmonary disease and polymorphisms in circadian genes
title Association analysis between chronic obstructive pulmonary disease and polymorphisms in circadian genes
title_full Association analysis between chronic obstructive pulmonary disease and polymorphisms in circadian genes
title_fullStr Association analysis between chronic obstructive pulmonary disease and polymorphisms in circadian genes
title_full_unstemmed Association analysis between chronic obstructive pulmonary disease and polymorphisms in circadian genes
title_short Association analysis between chronic obstructive pulmonary disease and polymorphisms in circadian genes
title_sort association analysis between chronic obstructive pulmonary disease and polymorphisms in circadian genes
topic Geriatrics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7456532/
https://www.ncbi.nlm.nih.gov/pubmed/32913680
http://dx.doi.org/10.7717/peerj.9806
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