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Association of Genetic Variation in the 3'UTR of LHX6, IMMP2L, and AADAC With Tourette Syndrome
Background: Tourette Syndrome (TS) is a neurodevelopmental disorder that presents with motor and vocal tics early in childhood. The aim of this study was to investigate genetic variants in the 3' untranslated region (3'UTR) of TS candidate genes with a putative link to microRNA (miRNA) med...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7457023/ https://www.ncbi.nlm.nih.gov/pubmed/32922348 http://dx.doi.org/10.3389/fneur.2020.00803 |
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author | Pagliaroli, Luca Vereczkei, Andrea Padmanabhuni, Shanmukha Sampath Tarnok, Zsanett Farkas, Luca Nagy, Peter Rizzo, Renata Wolanczyk, Tomasz Szymanska, Urszula Kapisyzi, Mira Basha, Entela Koumoula, Anastasia Androutsos, Christos Tsironi, Vaia Karagiannidis, Iordanis Paschou, Peristera Barta, Csaba |
author_facet | Pagliaroli, Luca Vereczkei, Andrea Padmanabhuni, Shanmukha Sampath Tarnok, Zsanett Farkas, Luca Nagy, Peter Rizzo, Renata Wolanczyk, Tomasz Szymanska, Urszula Kapisyzi, Mira Basha, Entela Koumoula, Anastasia Androutsos, Christos Tsironi, Vaia Karagiannidis, Iordanis Paschou, Peristera Barta, Csaba |
author_sort | Pagliaroli, Luca |
collection | PubMed |
description | Background: Tourette Syndrome (TS) is a neurodevelopmental disorder that presents with motor and vocal tics early in childhood. The aim of this study was to investigate genetic variants in the 3' untranslated region (3'UTR) of TS candidate genes with a putative link to microRNA (miRNA) mediated regulation or gene expression. Methods: We used an in silico approach to identify 32 variants in the 3'UTR of 18 candidate genes putatively changing the binding site for miRNAs. In a sample composed of TS cases and controls (n = 290), as well as TS family trios (n = 148), we performed transmission disequilibrium test (TDT) and meta-analysis. Results: We found positive association of rs3750486 in the LIM homeobox 6 (LHX6) gene (p = 0.021) and rs7795011 in the inner mitochondrial membrane peptidase subunit 2 (IMMP2L) gene (p = 0.029) with TS in our meta-analysis. The TDT showed an over-transmission of the A allele of rs1042201 in the arylacetamide deacetylase (AADAC) gene in TS patients (p = 0.029). Conclusion: This preliminary study provides further support for the involvement of LHX6, IMMP2L, and AADAC genes, as well as epigenetic mechanisms, such as altered miRNA mediated gene expression regulation in the etiology of TS. |
format | Online Article Text |
id | pubmed-7457023 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-74570232020-09-11 Association of Genetic Variation in the 3'UTR of LHX6, IMMP2L, and AADAC With Tourette Syndrome Pagliaroli, Luca Vereczkei, Andrea Padmanabhuni, Shanmukha Sampath Tarnok, Zsanett Farkas, Luca Nagy, Peter Rizzo, Renata Wolanczyk, Tomasz Szymanska, Urszula Kapisyzi, Mira Basha, Entela Koumoula, Anastasia Androutsos, Christos Tsironi, Vaia Karagiannidis, Iordanis Paschou, Peristera Barta, Csaba Front Neurol Neurology Background: Tourette Syndrome (TS) is a neurodevelopmental disorder that presents with motor and vocal tics early in childhood. The aim of this study was to investigate genetic variants in the 3' untranslated region (3'UTR) of TS candidate genes with a putative link to microRNA (miRNA) mediated regulation or gene expression. Methods: We used an in silico approach to identify 32 variants in the 3'UTR of 18 candidate genes putatively changing the binding site for miRNAs. In a sample composed of TS cases and controls (n = 290), as well as TS family trios (n = 148), we performed transmission disequilibrium test (TDT) and meta-analysis. Results: We found positive association of rs3750486 in the LIM homeobox 6 (LHX6) gene (p = 0.021) and rs7795011 in the inner mitochondrial membrane peptidase subunit 2 (IMMP2L) gene (p = 0.029) with TS in our meta-analysis. The TDT showed an over-transmission of the A allele of rs1042201 in the arylacetamide deacetylase (AADAC) gene in TS patients (p = 0.029). Conclusion: This preliminary study provides further support for the involvement of LHX6, IMMP2L, and AADAC genes, as well as epigenetic mechanisms, such as altered miRNA mediated gene expression regulation in the etiology of TS. Frontiers Media S.A. 2020-08-14 /pmc/articles/PMC7457023/ /pubmed/32922348 http://dx.doi.org/10.3389/fneur.2020.00803 Text en Copyright © 2020 Pagliaroli, Vereczkei, Padmanabhuni, Tarnok, Farkas, Nagy, Rizzo, Wolanczyk, Szymanska, Kapisyzi, Basha, Koumoula, Androutsos, Tsironi, Karagiannidis, Paschou and Barta. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neurology Pagliaroli, Luca Vereczkei, Andrea Padmanabhuni, Shanmukha Sampath Tarnok, Zsanett Farkas, Luca Nagy, Peter Rizzo, Renata Wolanczyk, Tomasz Szymanska, Urszula Kapisyzi, Mira Basha, Entela Koumoula, Anastasia Androutsos, Christos Tsironi, Vaia Karagiannidis, Iordanis Paschou, Peristera Barta, Csaba Association of Genetic Variation in the 3'UTR of LHX6, IMMP2L, and AADAC With Tourette Syndrome |
title | Association of Genetic Variation in the 3'UTR of LHX6, IMMP2L, and AADAC With Tourette Syndrome |
title_full | Association of Genetic Variation in the 3'UTR of LHX6, IMMP2L, and AADAC With Tourette Syndrome |
title_fullStr | Association of Genetic Variation in the 3'UTR of LHX6, IMMP2L, and AADAC With Tourette Syndrome |
title_full_unstemmed | Association of Genetic Variation in the 3'UTR of LHX6, IMMP2L, and AADAC With Tourette Syndrome |
title_short | Association of Genetic Variation in the 3'UTR of LHX6, IMMP2L, and AADAC With Tourette Syndrome |
title_sort | association of genetic variation in the 3'utr of lhx6, immp2l, and aadac with tourette syndrome |
topic | Neurology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7457023/ https://www.ncbi.nlm.nih.gov/pubmed/32922348 http://dx.doi.org/10.3389/fneur.2020.00803 |
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