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1,2,3-Triazolylmethaneboronate: A Structure Activity Relationship Study of a Class of β-Lactamase Inhibitors against Acinetobacter baumannii Cephalosporinase

[Image: see text] Boronic acid transition state inhibitors (BATSIs) are known reversible covalent inhibitors of serine β-lactamases. The selectivity and high potency of specific BATSIs bearing an amide side chain mimicking the β-lactam’s amide side chain are an established and recognized synthetic s...

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Autores principales: Caselli, Emilia, Fini, Francesco, Introvigne, Maria Luisa, Stucchi, Mattia, Taracila, Magdalena A., Fish, Erin R., Smolen, Kali A., Rather, Philip N., Powers, Rachel A., Wallar, Bradley J., Bonomo, Robert A., Prati, Fabio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2020
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7458062/
https://www.ncbi.nlm.nih.gov/pubmed/32502340
http://dx.doi.org/10.1021/acsinfecdis.0c00254
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author Caselli, Emilia
Fini, Francesco
Introvigne, Maria Luisa
Stucchi, Mattia
Taracila, Magdalena A.
Fish, Erin R.
Smolen, Kali A.
Rather, Philip N.
Powers, Rachel A.
Wallar, Bradley J.
Bonomo, Robert A.
Prati, Fabio
author_facet Caselli, Emilia
Fini, Francesco
Introvigne, Maria Luisa
Stucchi, Mattia
Taracila, Magdalena A.
Fish, Erin R.
Smolen, Kali A.
Rather, Philip N.
Powers, Rachel A.
Wallar, Bradley J.
Bonomo, Robert A.
Prati, Fabio
author_sort Caselli, Emilia
collection PubMed
description [Image: see text] Boronic acid transition state inhibitors (BATSIs) are known reversible covalent inhibitors of serine β-lactamases. The selectivity and high potency of specific BATSIs bearing an amide side chain mimicking the β-lactam’s amide side chain are an established and recognized synthetic strategy. Herein, we describe a new class of BATSIs where the amide group is replaced by a bioisostere triazole; these compounds were designed as molecular probes. To this end, a library of 26 α-triazolylmethaneboronic acids was synthesized and tested against the clinically concerning Acinetobacter-derived cephalosporinase, ADC-7. In steady state analyses, these compounds demonstrated K(i) values ranging from 90 nM to 38 μM (±10%). Five compounds were crystallized in complex with ADC-7 β-lactamase, and all the crystal structures reveal the triazole is in the putative amide binding site, thus confirming the triazole–amide bioisosterism. The easy synthetic access of these new inhibitors as prototype scaffolds allows the insertion of a wide range of chemical groups able to explore the enzyme binding site and provides insights on the importance of specific residues in recognition and catalysis. The best inhibitor identified, compound 6q (K(i) 90 nM), places a tolyl group near Arg340, making favorable cation−π interactions. Notably, the structure of 6q does not resemble the natural substrate of the β-lactamase yet displays a pronounced inhibition activity, in addition to lowering the minimum inhibitory concentration (MIC) of ceftazidime against three bacterial strains expressing class C β-lactamases. In summary, these observations validate the α-triazolylboronic acids as a promising template for further inhibitor design.
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spelling pubmed-74580622021-02-24 1,2,3-Triazolylmethaneboronate: A Structure Activity Relationship Study of a Class of β-Lactamase Inhibitors against Acinetobacter baumannii Cephalosporinase Caselli, Emilia Fini, Francesco Introvigne, Maria Luisa Stucchi, Mattia Taracila, Magdalena A. Fish, Erin R. Smolen, Kali A. Rather, Philip N. Powers, Rachel A. Wallar, Bradley J. Bonomo, Robert A. Prati, Fabio ACS Infect Dis [Image: see text] Boronic acid transition state inhibitors (BATSIs) are known reversible covalent inhibitors of serine β-lactamases. The selectivity and high potency of specific BATSIs bearing an amide side chain mimicking the β-lactam’s amide side chain are an established and recognized synthetic strategy. Herein, we describe a new class of BATSIs where the amide group is replaced by a bioisostere triazole; these compounds were designed as molecular probes. To this end, a library of 26 α-triazolylmethaneboronic acids was synthesized and tested against the clinically concerning Acinetobacter-derived cephalosporinase, ADC-7. In steady state analyses, these compounds demonstrated K(i) values ranging from 90 nM to 38 μM (±10%). Five compounds were crystallized in complex with ADC-7 β-lactamase, and all the crystal structures reveal the triazole is in the putative amide binding site, thus confirming the triazole–amide bioisosterism. The easy synthetic access of these new inhibitors as prototype scaffolds allows the insertion of a wide range of chemical groups able to explore the enzyme binding site and provides insights on the importance of specific residues in recognition and catalysis. The best inhibitor identified, compound 6q (K(i) 90 nM), places a tolyl group near Arg340, making favorable cation−π interactions. Notably, the structure of 6q does not resemble the natural substrate of the β-lactamase yet displays a pronounced inhibition activity, in addition to lowering the minimum inhibitory concentration (MIC) of ceftazidime against three bacterial strains expressing class C β-lactamases. In summary, these observations validate the α-triazolylboronic acids as a promising template for further inhibitor design. American Chemical Society 2020-06-05 2020-07-10 /pmc/articles/PMC7458062/ /pubmed/32502340 http://dx.doi.org/10.1021/acsinfecdis.0c00254 Text en Made available through a Creative Commons CC-BY License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html)
spellingShingle Caselli, Emilia
Fini, Francesco
Introvigne, Maria Luisa
Stucchi, Mattia
Taracila, Magdalena A.
Fish, Erin R.
Smolen, Kali A.
Rather, Philip N.
Powers, Rachel A.
Wallar, Bradley J.
Bonomo, Robert A.
Prati, Fabio
1,2,3-Triazolylmethaneboronate: A Structure Activity Relationship Study of a Class of β-Lactamase Inhibitors against Acinetobacter baumannii Cephalosporinase
title 1,2,3-Triazolylmethaneboronate: A Structure Activity Relationship Study of a Class of β-Lactamase Inhibitors against Acinetobacter baumannii Cephalosporinase
title_full 1,2,3-Triazolylmethaneboronate: A Structure Activity Relationship Study of a Class of β-Lactamase Inhibitors against Acinetobacter baumannii Cephalosporinase
title_fullStr 1,2,3-Triazolylmethaneboronate: A Structure Activity Relationship Study of a Class of β-Lactamase Inhibitors against Acinetobacter baumannii Cephalosporinase
title_full_unstemmed 1,2,3-Triazolylmethaneboronate: A Structure Activity Relationship Study of a Class of β-Lactamase Inhibitors against Acinetobacter baumannii Cephalosporinase
title_short 1,2,3-Triazolylmethaneboronate: A Structure Activity Relationship Study of a Class of β-Lactamase Inhibitors against Acinetobacter baumannii Cephalosporinase
title_sort 1,2,3-triazolylmethaneboronate: a structure activity relationship study of a class of β-lactamase inhibitors against acinetobacter baumannii cephalosporinase
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7458062/
https://www.ncbi.nlm.nih.gov/pubmed/32502340
http://dx.doi.org/10.1021/acsinfecdis.0c00254
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