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Automatic Process Comparison for Subpopulations: Application in Cancer Care (†)

Processes in organisations, such as hospitals, may deviate from the intended standard processes, due to unforeseeable events and the complexity of the organisation. For hospitals, the knowledge of actual patient streams for patient populations (e.g., severe or non-severe cases) is important for qual...

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Autores principales: Marazza, Francesca, Bukhsh, Faiza Allah, Geerdink, Jeroen, Vijlbrief, Onno, Pathak, Shreyasi, van Keulen, Maurice, Seifert, Christin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7460145/
https://www.ncbi.nlm.nih.gov/pubmed/32784617
http://dx.doi.org/10.3390/ijerph17165707
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author Marazza, Francesca
Bukhsh, Faiza Allah
Geerdink, Jeroen
Vijlbrief, Onno
Pathak, Shreyasi
van Keulen, Maurice
Seifert, Christin
author_facet Marazza, Francesca
Bukhsh, Faiza Allah
Geerdink, Jeroen
Vijlbrief, Onno
Pathak, Shreyasi
van Keulen, Maurice
Seifert, Christin
author_sort Marazza, Francesca
collection PubMed
description Processes in organisations, such as hospitals, may deviate from the intended standard processes, due to unforeseeable events and the complexity of the organisation. For hospitals, the knowledge of actual patient streams for patient populations (e.g., severe or non-severe cases) is important for quality control and improvement. Process discovery from event data in electronic health records can shed light on the patient flows, but their comparison for different populations is cumbersome and time-consuming. In this paper, we present an approach for the automatic comparison of process models that were extracted from events in electronic health records. Concretely, we propose comparing processes for different patient populations by cross-log conformance checking, and standard graph similarity measures obtained from the directed graph underlying the process model. We perform a user study with 20 participants in order to obtain a ground truth for similarity of process models. We evaluate our approach on two data sets, the publicly available MIMIC database with the focus on different cancer patients in intensive care, and a database on breast cancer patients from a Dutch hospital. In our experiments, we found average fitness to be a good indicator for visual similarity in the ZGT use case, while the average precision and graph edit distance are strongly correlated with visual impression for cancer process models on MIMIC. These results are a call for further research and evaluation for determining which similarity or combination of similarities is needed in which type of process model comparison.
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spelling pubmed-74601452020-09-02 Automatic Process Comparison for Subpopulations: Application in Cancer Care (†) Marazza, Francesca Bukhsh, Faiza Allah Geerdink, Jeroen Vijlbrief, Onno Pathak, Shreyasi van Keulen, Maurice Seifert, Christin Int J Environ Res Public Health Article Processes in organisations, such as hospitals, may deviate from the intended standard processes, due to unforeseeable events and the complexity of the organisation. For hospitals, the knowledge of actual patient streams for patient populations (e.g., severe or non-severe cases) is important for quality control and improvement. Process discovery from event data in electronic health records can shed light on the patient flows, but their comparison for different populations is cumbersome and time-consuming. In this paper, we present an approach for the automatic comparison of process models that were extracted from events in electronic health records. Concretely, we propose comparing processes for different patient populations by cross-log conformance checking, and standard graph similarity measures obtained from the directed graph underlying the process model. We perform a user study with 20 participants in order to obtain a ground truth for similarity of process models. We evaluate our approach on two data sets, the publicly available MIMIC database with the focus on different cancer patients in intensive care, and a database on breast cancer patients from a Dutch hospital. In our experiments, we found average fitness to be a good indicator for visual similarity in the ZGT use case, while the average precision and graph edit distance are strongly correlated with visual impression for cancer process models on MIMIC. These results are a call for further research and evaluation for determining which similarity or combination of similarities is needed in which type of process model comparison. MDPI 2020-08-07 2020-08 /pmc/articles/PMC7460145/ /pubmed/32784617 http://dx.doi.org/10.3390/ijerph17165707 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Marazza, Francesca
Bukhsh, Faiza Allah
Geerdink, Jeroen
Vijlbrief, Onno
Pathak, Shreyasi
van Keulen, Maurice
Seifert, Christin
Automatic Process Comparison for Subpopulations: Application in Cancer Care (†)
title Automatic Process Comparison for Subpopulations: Application in Cancer Care (†)
title_full Automatic Process Comparison for Subpopulations: Application in Cancer Care (†)
title_fullStr Automatic Process Comparison for Subpopulations: Application in Cancer Care (†)
title_full_unstemmed Automatic Process Comparison for Subpopulations: Application in Cancer Care (†)
title_short Automatic Process Comparison for Subpopulations: Application in Cancer Care (†)
title_sort automatic process comparison for subpopulations: application in cancer care (†)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7460145/
https://www.ncbi.nlm.nih.gov/pubmed/32784617
http://dx.doi.org/10.3390/ijerph17165707
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