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The Performance of Deep Neural Networks in Differentiating Chest X-Rays of COVID-19 Patients From Other Bacterial and Viral Pneumonias

Chest radiography is a critical tool in the early detection, management planning, and follow-up evaluation of COVID-19 pneumonia; however, in smaller clinics around the world, there is a shortage of radiologists to analyze large number of examinations especially performed during a pandemic. Limited...

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Autores principales: Elgendi, Mohamed, Nasir, Muhammad Umer, Tang, Qunfeng, Fletcher, Richard Ribon, Howard, Newton, Menon, Carlo, Ward, Rabab, Parker, William, Nicolaou, Savvas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7461795/
https://www.ncbi.nlm.nih.gov/pubmed/33015100
http://dx.doi.org/10.3389/fmed.2020.00550
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author Elgendi, Mohamed
Nasir, Muhammad Umer
Tang, Qunfeng
Fletcher, Richard Ribon
Howard, Newton
Menon, Carlo
Ward, Rabab
Parker, William
Nicolaou, Savvas
author_facet Elgendi, Mohamed
Nasir, Muhammad Umer
Tang, Qunfeng
Fletcher, Richard Ribon
Howard, Newton
Menon, Carlo
Ward, Rabab
Parker, William
Nicolaou, Savvas
author_sort Elgendi, Mohamed
collection PubMed
description Chest radiography is a critical tool in the early detection, management planning, and follow-up evaluation of COVID-19 pneumonia; however, in smaller clinics around the world, there is a shortage of radiologists to analyze large number of examinations especially performed during a pandemic. Limited availability of high-resolution computed tomography and real-time polymerase chain reaction in developing countries and regions of high patient turnover also emphasizes the importance of chest radiography as both a screening and diagnostic tool. In this paper, we compare the performance of 17 available deep learning algorithms to help identify imaging features of COVID19 pneumonia. We utilize an existing diagnostic technology (chest radiography) and preexisting neural networks (DarkNet-19) to detect imaging features of COVID-19 pneumonia. Our approach eliminates the extra time and resources needed to develop new technology and associated algorithms, thus aiding the front-line healthcare workers in the race against the COVID-19 pandemic. Our results show that DarkNet-19 is the optimal pre-trained neural network for the detection of radiographic features of COVID-19 pneumonia, scoring an overall accuracy of 94.28% over 5,854 X-ray images. We also present a custom visualization of the results that can be used to highlight important visual biomarkers of the disease and disease progression.
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spelling pubmed-74617952020-10-01 The Performance of Deep Neural Networks in Differentiating Chest X-Rays of COVID-19 Patients From Other Bacterial and Viral Pneumonias Elgendi, Mohamed Nasir, Muhammad Umer Tang, Qunfeng Fletcher, Richard Ribon Howard, Newton Menon, Carlo Ward, Rabab Parker, William Nicolaou, Savvas Front Med (Lausanne) Medicine Chest radiography is a critical tool in the early detection, management planning, and follow-up evaluation of COVID-19 pneumonia; however, in smaller clinics around the world, there is a shortage of radiologists to analyze large number of examinations especially performed during a pandemic. Limited availability of high-resolution computed tomography and real-time polymerase chain reaction in developing countries and regions of high patient turnover also emphasizes the importance of chest radiography as both a screening and diagnostic tool. In this paper, we compare the performance of 17 available deep learning algorithms to help identify imaging features of COVID19 pneumonia. We utilize an existing diagnostic technology (chest radiography) and preexisting neural networks (DarkNet-19) to detect imaging features of COVID-19 pneumonia. Our approach eliminates the extra time and resources needed to develop new technology and associated algorithms, thus aiding the front-line healthcare workers in the race against the COVID-19 pandemic. Our results show that DarkNet-19 is the optimal pre-trained neural network for the detection of radiographic features of COVID-19 pneumonia, scoring an overall accuracy of 94.28% over 5,854 X-ray images. We also present a custom visualization of the results that can be used to highlight important visual biomarkers of the disease and disease progression. Frontiers Media S.A. 2020-08-18 /pmc/articles/PMC7461795/ /pubmed/33015100 http://dx.doi.org/10.3389/fmed.2020.00550 Text en Copyright © 2020 Elgendi, Nasir, Tang, Fletcher, Howard, Menon, Ward, Parker and Nicolaou. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Elgendi, Mohamed
Nasir, Muhammad Umer
Tang, Qunfeng
Fletcher, Richard Ribon
Howard, Newton
Menon, Carlo
Ward, Rabab
Parker, William
Nicolaou, Savvas
The Performance of Deep Neural Networks in Differentiating Chest X-Rays of COVID-19 Patients From Other Bacterial and Viral Pneumonias
title The Performance of Deep Neural Networks in Differentiating Chest X-Rays of COVID-19 Patients From Other Bacterial and Viral Pneumonias
title_full The Performance of Deep Neural Networks in Differentiating Chest X-Rays of COVID-19 Patients From Other Bacterial and Viral Pneumonias
title_fullStr The Performance of Deep Neural Networks in Differentiating Chest X-Rays of COVID-19 Patients From Other Bacterial and Viral Pneumonias
title_full_unstemmed The Performance of Deep Neural Networks in Differentiating Chest X-Rays of COVID-19 Patients From Other Bacterial and Viral Pneumonias
title_short The Performance of Deep Neural Networks in Differentiating Chest X-Rays of COVID-19 Patients From Other Bacterial and Viral Pneumonias
title_sort performance of deep neural networks in differentiating chest x-rays of covid-19 patients from other bacterial and viral pneumonias
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7461795/
https://www.ncbi.nlm.nih.gov/pubmed/33015100
http://dx.doi.org/10.3389/fmed.2020.00550
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