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Prognostic significance of ARL9 and its methylation in low-grade glioma

This study aimed to determine the value of ARL9 expression or methylation as a biomarker for LGG survival. We investigated the expression, methylation, prognosis and immune significance of ARL9 through bioinformatics analysis. ARL9 is negatively regulated by ARL9 methylation, leading to its low expr...

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Autores principales: Tan, Yutang, Zhang, Suojun, Xiao, Qungen, Wang, Junwen, Zhao, Kai, Liu, Weihua, Huang, Kuan, Tian, Weidong, Niu, Hongquan, Lei, Ting, Shu, Kai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7462573/
https://www.ncbi.nlm.nih.gov/pubmed/32882327
http://dx.doi.org/10.1016/j.ygeno.2020.08.035
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author Tan, Yutang
Zhang, Suojun
Xiao, Qungen
Wang, Junwen
Zhao, Kai
Liu, Weihua
Huang, Kuan
Tian, Weidong
Niu, Hongquan
Lei, Ting
Shu, Kai
author_facet Tan, Yutang
Zhang, Suojun
Xiao, Qungen
Wang, Junwen
Zhao, Kai
Liu, Weihua
Huang, Kuan
Tian, Weidong
Niu, Hongquan
Lei, Ting
Shu, Kai
author_sort Tan, Yutang
collection PubMed
description This study aimed to determine the value of ARL9 expression or methylation as a biomarker for LGG survival. We investigated the expression, methylation, prognosis and immune significance of ARL9 through bioinformatics analysis. ARL9 is negatively regulated by ARL9 methylation, leading to its low expression in LGG tissues. Both low ARL9 expression and hypermethylation predicted favorable OS and PFS in LGG patients, according to the TCGA database. Cox regression demonstrated that low ARL9 expression and ARL9 hypermethylation were independent biomarkers for OS. Moreover, three other glioma databases were utilized to verify the prognostic role of ARL9 in LGG, and the similar results were reached. A meta-analysis revealed that low ARL9 expression was closely relevant to better OS. Finally, ARL9 expression exhibited a close correlation with some immune cells, especially CD8+ T cells. ARL9 could constitute a promising prognostic biomarker, and probably plays an important role in immune cell infiltration in LGG.
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spelling pubmed-74625732020-09-02 Prognostic significance of ARL9 and its methylation in low-grade glioma Tan, Yutang Zhang, Suojun Xiao, Qungen Wang, Junwen Zhao, Kai Liu, Weihua Huang, Kuan Tian, Weidong Niu, Hongquan Lei, Ting Shu, Kai Genomics Article This study aimed to determine the value of ARL9 expression or methylation as a biomarker for LGG survival. We investigated the expression, methylation, prognosis and immune significance of ARL9 through bioinformatics analysis. ARL9 is negatively regulated by ARL9 methylation, leading to its low expression in LGG tissues. Both low ARL9 expression and hypermethylation predicted favorable OS and PFS in LGG patients, according to the TCGA database. Cox regression demonstrated that low ARL9 expression and ARL9 hypermethylation were independent biomarkers for OS. Moreover, three other glioma databases were utilized to verify the prognostic role of ARL9 in LGG, and the similar results were reached. A meta-analysis revealed that low ARL9 expression was closely relevant to better OS. Finally, ARL9 expression exhibited a close correlation with some immune cells, especially CD8+ T cells. ARL9 could constitute a promising prognostic biomarker, and probably plays an important role in immune cell infiltration in LGG. Elsevier Inc. 2020-11 2020-09-01 /pmc/articles/PMC7462573/ /pubmed/32882327 http://dx.doi.org/10.1016/j.ygeno.2020.08.035 Text en © 2020 Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Tan, Yutang
Zhang, Suojun
Xiao, Qungen
Wang, Junwen
Zhao, Kai
Liu, Weihua
Huang, Kuan
Tian, Weidong
Niu, Hongquan
Lei, Ting
Shu, Kai
Prognostic significance of ARL9 and its methylation in low-grade glioma
title Prognostic significance of ARL9 and its methylation in low-grade glioma
title_full Prognostic significance of ARL9 and its methylation in low-grade glioma
title_fullStr Prognostic significance of ARL9 and its methylation in low-grade glioma
title_full_unstemmed Prognostic significance of ARL9 and its methylation in low-grade glioma
title_short Prognostic significance of ARL9 and its methylation in low-grade glioma
title_sort prognostic significance of arl9 and its methylation in low-grade glioma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7462573/
https://www.ncbi.nlm.nih.gov/pubmed/32882327
http://dx.doi.org/10.1016/j.ygeno.2020.08.035
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