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(1)H, (13)C and (15)N backbone resonance assignment of BRCA1 fragment 219–504
The breast cancer susceptibility protein 1 (BRCA1) plays a central role in the suppression of human breast and ovarian cancer. Germ line mutations of the BRCA1 gene are responsible for the hereditary breast and ovarian cancer (HBOC) syndrome. Here were report (1)H, (13)C, and (15)N resonance assignm...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer Netherlands
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7462910/ https://www.ncbi.nlm.nih.gov/pubmed/32583165 http://dx.doi.org/10.1007/s12104-020-09963-6 |
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author | Górka, Michał Żerko, Szymon Konrat, Robert Koźmiński, Wiktor Kurzbach, Dennis |
author_facet | Górka, Michał Żerko, Szymon Konrat, Robert Koźmiński, Wiktor Kurzbach, Dennis |
author_sort | Górka, Michał |
collection | PubMed |
description | The breast cancer susceptibility protein 1 (BRCA1) plays a central role in the suppression of human breast and ovarian cancer. Germ line mutations of the BRCA1 gene are responsible for the hereditary breast and ovarian cancer (HBOC) syndrome. Here were report (1)H, (13)C, and (15)N resonance assignments for the intrinsically disordered BRCA1 fragment 219–504, which contains important interaction sites for the proto-oncogenic transcription factor MYC as well as for p53. A nuclear magnetic resonance assignment was achieved at 18.8 T magnetic field strength using a 5D HN(CA)CONH experiment and its associated 4D H(NCA)CONH and 4D (H)N(CA)CONH experiments. (13)C(α) and (13)C(β) assignments were obtained using a 5D HabCabCONH experiment. With this strategy, 90% of (1)H/(15)N backbone pairs could be assigned. Similarly, 264 C’ resonances were assigned corresponding to 86% of the total number of C’ atoms. In addition, 252 C(β) resonances (i.e. 85%) were assigned, together with 461 attached H(β) nuclei, as well as 264 (i.e. 86%) C(α) resonances, together with 275 attached H(α) nuclei. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s12104-020-09963-6) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-7462910 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-74629102020-09-11 (1)H, (13)C and (15)N backbone resonance assignment of BRCA1 fragment 219–504 Górka, Michał Żerko, Szymon Konrat, Robert Koźmiński, Wiktor Kurzbach, Dennis Biomol NMR Assign Article The breast cancer susceptibility protein 1 (BRCA1) plays a central role in the suppression of human breast and ovarian cancer. Germ line mutations of the BRCA1 gene are responsible for the hereditary breast and ovarian cancer (HBOC) syndrome. Here were report (1)H, (13)C, and (15)N resonance assignments for the intrinsically disordered BRCA1 fragment 219–504, which contains important interaction sites for the proto-oncogenic transcription factor MYC as well as for p53. A nuclear magnetic resonance assignment was achieved at 18.8 T magnetic field strength using a 5D HN(CA)CONH experiment and its associated 4D H(NCA)CONH and 4D (H)N(CA)CONH experiments. (13)C(α) and (13)C(β) assignments were obtained using a 5D HabCabCONH experiment. With this strategy, 90% of (1)H/(15)N backbone pairs could be assigned. Similarly, 264 C’ resonances were assigned corresponding to 86% of the total number of C’ atoms. In addition, 252 C(β) resonances (i.e. 85%) were assigned, together with 461 attached H(β) nuclei, as well as 264 (i.e. 86%) C(α) resonances, together with 275 attached H(α) nuclei. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s12104-020-09963-6) contains supplementary material, which is available to authorized users. Springer Netherlands 2020-06-24 2020 /pmc/articles/PMC7462910/ /pubmed/32583165 http://dx.doi.org/10.1007/s12104-020-09963-6 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Górka, Michał Żerko, Szymon Konrat, Robert Koźmiński, Wiktor Kurzbach, Dennis (1)H, (13)C and (15)N backbone resonance assignment of BRCA1 fragment 219–504 |
title | (1)H, (13)C and (15)N backbone resonance assignment of BRCA1 fragment 219–504 |
title_full | (1)H, (13)C and (15)N backbone resonance assignment of BRCA1 fragment 219–504 |
title_fullStr | (1)H, (13)C and (15)N backbone resonance assignment of BRCA1 fragment 219–504 |
title_full_unstemmed | (1)H, (13)C and (15)N backbone resonance assignment of BRCA1 fragment 219–504 |
title_short | (1)H, (13)C and (15)N backbone resonance assignment of BRCA1 fragment 219–504 |
title_sort | (1)h, (13)c and (15)n backbone resonance assignment of brca1 fragment 219–504 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7462910/ https://www.ncbi.nlm.nih.gov/pubmed/32583165 http://dx.doi.org/10.1007/s12104-020-09963-6 |
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