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Quantifying drug tissue biodistribution by integrating high content screening with deep-learning analysis

Quantitatively determining in vivo achievable drug concentrations in targeted organs of animal models and subsequent target engagement confirmation is a challenge to drug discovery and translation due to lack of bioassay technologies that can discriminate drug binding with different mechanisms. We h...

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Autores principales: Li, Zhuyin, Xiao, Youping, Peng, Jia, Locke, Darren, Holmes, Derek, Li, Lei, Hamilton, Shannon, Cook, Erica, Myer, Larnie, Vanderwall, Dana, Cloutier, Normand, Siddiqui, Akbar M., Whitehead, Paul, Bishop, Richard, Zhao, Lei, Cvijic, Mary Ellen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7463244/
https://www.ncbi.nlm.nih.gov/pubmed/32873881
http://dx.doi.org/10.1038/s41598-020-71347-6
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author Li, Zhuyin
Xiao, Youping
Peng, Jia
Locke, Darren
Holmes, Derek
Li, Lei
Hamilton, Shannon
Cook, Erica
Myer, Larnie
Vanderwall, Dana
Cloutier, Normand
Siddiqui, Akbar M.
Whitehead, Paul
Bishop, Richard
Zhao, Lei
Cvijic, Mary Ellen
author_facet Li, Zhuyin
Xiao, Youping
Peng, Jia
Locke, Darren
Holmes, Derek
Li, Lei
Hamilton, Shannon
Cook, Erica
Myer, Larnie
Vanderwall, Dana
Cloutier, Normand
Siddiqui, Akbar M.
Whitehead, Paul
Bishop, Richard
Zhao, Lei
Cvijic, Mary Ellen
author_sort Li, Zhuyin
collection PubMed
description Quantitatively determining in vivo achievable drug concentrations in targeted organs of animal models and subsequent target engagement confirmation is a challenge to drug discovery and translation due to lack of bioassay technologies that can discriminate drug binding with different mechanisms. We have developed a multiplexed and high-throughput method to quantify drug distribution in tissues by integrating high content screening (HCS) with U-Net based deep learning (DL) image analysis models. This technology combination allowed direct visualization and quantification of biologics drug binding in targeted tissues with cellular resolution, thus enabling biologists to objectively determine drug binding kinetics.
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spelling pubmed-74632442020-09-03 Quantifying drug tissue biodistribution by integrating high content screening with deep-learning analysis Li, Zhuyin Xiao, Youping Peng, Jia Locke, Darren Holmes, Derek Li, Lei Hamilton, Shannon Cook, Erica Myer, Larnie Vanderwall, Dana Cloutier, Normand Siddiqui, Akbar M. Whitehead, Paul Bishop, Richard Zhao, Lei Cvijic, Mary Ellen Sci Rep Article Quantitatively determining in vivo achievable drug concentrations in targeted organs of animal models and subsequent target engagement confirmation is a challenge to drug discovery and translation due to lack of bioassay technologies that can discriminate drug binding with different mechanisms. We have developed a multiplexed and high-throughput method to quantify drug distribution in tissues by integrating high content screening (HCS) with U-Net based deep learning (DL) image analysis models. This technology combination allowed direct visualization and quantification of biologics drug binding in targeted tissues with cellular resolution, thus enabling biologists to objectively determine drug binding kinetics. Nature Publishing Group UK 2020-09-01 /pmc/articles/PMC7463244/ /pubmed/32873881 http://dx.doi.org/10.1038/s41598-020-71347-6 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Li, Zhuyin
Xiao, Youping
Peng, Jia
Locke, Darren
Holmes, Derek
Li, Lei
Hamilton, Shannon
Cook, Erica
Myer, Larnie
Vanderwall, Dana
Cloutier, Normand
Siddiqui, Akbar M.
Whitehead, Paul
Bishop, Richard
Zhao, Lei
Cvijic, Mary Ellen
Quantifying drug tissue biodistribution by integrating high content screening with deep-learning analysis
title Quantifying drug tissue biodistribution by integrating high content screening with deep-learning analysis
title_full Quantifying drug tissue biodistribution by integrating high content screening with deep-learning analysis
title_fullStr Quantifying drug tissue biodistribution by integrating high content screening with deep-learning analysis
title_full_unstemmed Quantifying drug tissue biodistribution by integrating high content screening with deep-learning analysis
title_short Quantifying drug tissue biodistribution by integrating high content screening with deep-learning analysis
title_sort quantifying drug tissue biodistribution by integrating high content screening with deep-learning analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7463244/
https://www.ncbi.nlm.nih.gov/pubmed/32873881
http://dx.doi.org/10.1038/s41598-020-71347-6
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