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Genomic Characterization and Environmental Distribution of a Thermophilic Anaerobe Dissulfurirhabdus thermomarina SH388(T) Involved in Disproportionation of Sulfur Compounds in Shallow Sea Hydrothermal Vents

Marine hydrothermal systems are characterized by a pronounced biogeochemical sulfur cycle with the participation of sulfur-oxidizing, sulfate-reducing and sulfur-disproportionating microorganisms. The diversity and metabolism of sulfur disproportionators are studied to a much lesser extent compared...

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Autores principales: Allioux, Maxime, Yvenou, Stéven, Slobodkina, Galina, Slobodkin, Alexander, Shao, Zongze, Jebbar, Mohamed, Alain, Karine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7463578/
https://www.ncbi.nlm.nih.gov/pubmed/32727039
http://dx.doi.org/10.3390/microorganisms8081132
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author Allioux, Maxime
Yvenou, Stéven
Slobodkina, Galina
Slobodkin, Alexander
Shao, Zongze
Jebbar, Mohamed
Alain, Karine
author_facet Allioux, Maxime
Yvenou, Stéven
Slobodkina, Galina
Slobodkin, Alexander
Shao, Zongze
Jebbar, Mohamed
Alain, Karine
author_sort Allioux, Maxime
collection PubMed
description Marine hydrothermal systems are characterized by a pronounced biogeochemical sulfur cycle with the participation of sulfur-oxidizing, sulfate-reducing and sulfur-disproportionating microorganisms. The diversity and metabolism of sulfur disproportionators are studied to a much lesser extent compared with other microbial groups. Dissulfurirhabdus thermomarina SH388(T) is an anaerobic thermophilic bacterium isolated from a shallow sea hydrothermal vent. D. thermomarina is an obligate chemolithoautotroph able to grow by the disproportionation of sulfite and elemental sulfur. Here, we present the results of the sequencing and analysis of the high-quality draft genome of strain SH388(T). The genome consists of a one circular chromosome of 2,461,642 base pairs, has a G + C content of 71.1 mol% and 2267 protein-coding sequences. The genome analysis revealed a complete set of genes essential to CO(2) fixation via the reductive acetyl-CoA (Wood-Ljungdahl) pathway and gluconeogenesis. The genome of D. thermomarina encodes a complete set of genes necessary for the dissimilatory reduction of sulfates, which are probably involved in the disproportionation of sulfur. Data on the occurrences of Dissulfurirhabdus 16S rRNA gene sequences in gene libraries and metagenome datasets showed the worldwide distribution of the members of this genus. This study expands our knowledge of the microbial contribution into carbon and sulfur cycles in the marine hydrothermal environments.
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spelling pubmed-74635782020-09-02 Genomic Characterization and Environmental Distribution of a Thermophilic Anaerobe Dissulfurirhabdus thermomarina SH388(T) Involved in Disproportionation of Sulfur Compounds in Shallow Sea Hydrothermal Vents Allioux, Maxime Yvenou, Stéven Slobodkina, Galina Slobodkin, Alexander Shao, Zongze Jebbar, Mohamed Alain, Karine Microorganisms Article Marine hydrothermal systems are characterized by a pronounced biogeochemical sulfur cycle with the participation of sulfur-oxidizing, sulfate-reducing and sulfur-disproportionating microorganisms. The diversity and metabolism of sulfur disproportionators are studied to a much lesser extent compared with other microbial groups. Dissulfurirhabdus thermomarina SH388(T) is an anaerobic thermophilic bacterium isolated from a shallow sea hydrothermal vent. D. thermomarina is an obligate chemolithoautotroph able to grow by the disproportionation of sulfite and elemental sulfur. Here, we present the results of the sequencing and analysis of the high-quality draft genome of strain SH388(T). The genome consists of a one circular chromosome of 2,461,642 base pairs, has a G + C content of 71.1 mol% and 2267 protein-coding sequences. The genome analysis revealed a complete set of genes essential to CO(2) fixation via the reductive acetyl-CoA (Wood-Ljungdahl) pathway and gluconeogenesis. The genome of D. thermomarina encodes a complete set of genes necessary for the dissimilatory reduction of sulfates, which are probably involved in the disproportionation of sulfur. Data on the occurrences of Dissulfurirhabdus 16S rRNA gene sequences in gene libraries and metagenome datasets showed the worldwide distribution of the members of this genus. This study expands our knowledge of the microbial contribution into carbon and sulfur cycles in the marine hydrothermal environments. MDPI 2020-07-27 /pmc/articles/PMC7463578/ /pubmed/32727039 http://dx.doi.org/10.3390/microorganisms8081132 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Allioux, Maxime
Yvenou, Stéven
Slobodkina, Galina
Slobodkin, Alexander
Shao, Zongze
Jebbar, Mohamed
Alain, Karine
Genomic Characterization and Environmental Distribution of a Thermophilic Anaerobe Dissulfurirhabdus thermomarina SH388(T) Involved in Disproportionation of Sulfur Compounds in Shallow Sea Hydrothermal Vents
title Genomic Characterization and Environmental Distribution of a Thermophilic Anaerobe Dissulfurirhabdus thermomarina SH388(T) Involved in Disproportionation of Sulfur Compounds in Shallow Sea Hydrothermal Vents
title_full Genomic Characterization and Environmental Distribution of a Thermophilic Anaerobe Dissulfurirhabdus thermomarina SH388(T) Involved in Disproportionation of Sulfur Compounds in Shallow Sea Hydrothermal Vents
title_fullStr Genomic Characterization and Environmental Distribution of a Thermophilic Anaerobe Dissulfurirhabdus thermomarina SH388(T) Involved in Disproportionation of Sulfur Compounds in Shallow Sea Hydrothermal Vents
title_full_unstemmed Genomic Characterization and Environmental Distribution of a Thermophilic Anaerobe Dissulfurirhabdus thermomarina SH388(T) Involved in Disproportionation of Sulfur Compounds in Shallow Sea Hydrothermal Vents
title_short Genomic Characterization and Environmental Distribution of a Thermophilic Anaerobe Dissulfurirhabdus thermomarina SH388(T) Involved in Disproportionation of Sulfur Compounds in Shallow Sea Hydrothermal Vents
title_sort genomic characterization and environmental distribution of a thermophilic anaerobe dissulfurirhabdus thermomarina sh388(t) involved in disproportionation of sulfur compounds in shallow sea hydrothermal vents
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7463578/
https://www.ncbi.nlm.nih.gov/pubmed/32727039
http://dx.doi.org/10.3390/microorganisms8081132
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