Cargando…

What Drives the Diversity of the Most Abundant Terrestrial Cercozoan Family (Rhogostomidae, Cercozoa, Rhizaria)?

Environmental sequencing surveys of soils and freshwaters revealed high abundance and diversity of the Rhogostomidae, a group of omnivorous thecate amoebae. This is puzzling since only a few Rhogostomidae species have yet been described and only a handful of reports mention them in field surveys. We...

Descripción completa

Detalles Bibliográficos
Autores principales: Öztoprak, Hüsna, Walden, Susanne, Heger, Thierry, Bonkowski, Michael, Dumack, Kenneth
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7463998/
https://www.ncbi.nlm.nih.gov/pubmed/32722603
http://dx.doi.org/10.3390/microorganisms8081123
_version_ 1783577263051112448
author Öztoprak, Hüsna
Walden, Susanne
Heger, Thierry
Bonkowski, Michael
Dumack, Kenneth
author_facet Öztoprak, Hüsna
Walden, Susanne
Heger, Thierry
Bonkowski, Michael
Dumack, Kenneth
author_sort Öztoprak, Hüsna
collection PubMed
description Environmental sequencing surveys of soils and freshwaters revealed high abundance and diversity of the Rhogostomidae, a group of omnivorous thecate amoebae. This is puzzling since only a few Rhogostomidae species have yet been described and only a handful of reports mention them in field surveys. We investigated the putative cryptic diversity of the Rhogostomidae by a critical re-evaluation of published environmental sequencing data and in-depth ecological and morphological trait analyses. The Rhogostomidae exhibit an amazing diversity of genetically distinct clades that occur in a variety of different environments. We further broadly sampled for Rhogostomidae species; based on these isolates, we describe eleven new species and highlight important morphological traits for species delimitation. The most important environmental drivers that shape the Rhogostomidae community were soil moisture, soil pH, and total plant biomass. The length/width ratio of the theca was a morphological trait related to the colonized habitats, but not the shape and size of the aperture that is often linked to moisture adaption in testate and thecate amoebae.
format Online
Article
Text
id pubmed-7463998
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-74639982020-09-04 What Drives the Diversity of the Most Abundant Terrestrial Cercozoan Family (Rhogostomidae, Cercozoa, Rhizaria)? Öztoprak, Hüsna Walden, Susanne Heger, Thierry Bonkowski, Michael Dumack, Kenneth Microorganisms Article Environmental sequencing surveys of soils and freshwaters revealed high abundance and diversity of the Rhogostomidae, a group of omnivorous thecate amoebae. This is puzzling since only a few Rhogostomidae species have yet been described and only a handful of reports mention them in field surveys. We investigated the putative cryptic diversity of the Rhogostomidae by a critical re-evaluation of published environmental sequencing data and in-depth ecological and morphological trait analyses. The Rhogostomidae exhibit an amazing diversity of genetically distinct clades that occur in a variety of different environments. We further broadly sampled for Rhogostomidae species; based on these isolates, we describe eleven new species and highlight important morphological traits for species delimitation. The most important environmental drivers that shape the Rhogostomidae community were soil moisture, soil pH, and total plant biomass. The length/width ratio of the theca was a morphological trait related to the colonized habitats, but not the shape and size of the aperture that is often linked to moisture adaption in testate and thecate amoebae. MDPI 2020-07-26 /pmc/articles/PMC7463998/ /pubmed/32722603 http://dx.doi.org/10.3390/microorganisms8081123 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Öztoprak, Hüsna
Walden, Susanne
Heger, Thierry
Bonkowski, Michael
Dumack, Kenneth
What Drives the Diversity of the Most Abundant Terrestrial Cercozoan Family (Rhogostomidae, Cercozoa, Rhizaria)?
title What Drives the Diversity of the Most Abundant Terrestrial Cercozoan Family (Rhogostomidae, Cercozoa, Rhizaria)?
title_full What Drives the Diversity of the Most Abundant Terrestrial Cercozoan Family (Rhogostomidae, Cercozoa, Rhizaria)?
title_fullStr What Drives the Diversity of the Most Abundant Terrestrial Cercozoan Family (Rhogostomidae, Cercozoa, Rhizaria)?
title_full_unstemmed What Drives the Diversity of the Most Abundant Terrestrial Cercozoan Family (Rhogostomidae, Cercozoa, Rhizaria)?
title_short What Drives the Diversity of the Most Abundant Terrestrial Cercozoan Family (Rhogostomidae, Cercozoa, Rhizaria)?
title_sort what drives the diversity of the most abundant terrestrial cercozoan family (rhogostomidae, cercozoa, rhizaria)?
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7463998/
https://www.ncbi.nlm.nih.gov/pubmed/32722603
http://dx.doi.org/10.3390/microorganisms8081123
work_keys_str_mv AT oztoprakhusna whatdrivesthediversityofthemostabundantterrestrialcercozoanfamilyrhogostomidaecercozoarhizaria
AT waldensusanne whatdrivesthediversityofthemostabundantterrestrialcercozoanfamilyrhogostomidaecercozoarhizaria
AT hegerthierry whatdrivesthediversityofthemostabundantterrestrialcercozoanfamilyrhogostomidaecercozoarhizaria
AT bonkowskimichael whatdrivesthediversityofthemostabundantterrestrialcercozoanfamilyrhogostomidaecercozoarhizaria
AT dumackkenneth whatdrivesthediversityofthemostabundantterrestrialcercozoanfamilyrhogostomidaecercozoarhizaria