Cargando…

Loop-Mediated Isothermal Amplification (LAMP): A Rapid, Sensitive, Specific, and Cost-Effective Point-of-Care Test for Coronaviruses in the Context of COVID-19 Pandemic

The rampant spread of COVID-19 and the worldwide prevalence of infected cases demand a rapid, simple, and cost-effective Point of Care Test (PoCT) for the accurate diagnosis of this pandemic. The most common molecular tests approved by regulatory bodies across the world for COVID-19 diagnosis are ba...

Descripción completa

Detalles Bibliográficos
Autores principales: Augustine, Robin, Hasan, Anwarul, Das, Suvarthi, Ahmed, Rashid, Mori, Yasuyoshi, Notomi, Tsugunori, Kevadiya, Bhavesh D., S. Thakor, Avnesh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7464797/
https://www.ncbi.nlm.nih.gov/pubmed/32707972
http://dx.doi.org/10.3390/biology9080182
_version_ 1783577445930106880
author Augustine, Robin
Hasan, Anwarul
Das, Suvarthi
Ahmed, Rashid
Mori, Yasuyoshi
Notomi, Tsugunori
Kevadiya, Bhavesh D.
S. Thakor, Avnesh
author_facet Augustine, Robin
Hasan, Anwarul
Das, Suvarthi
Ahmed, Rashid
Mori, Yasuyoshi
Notomi, Tsugunori
Kevadiya, Bhavesh D.
S. Thakor, Avnesh
author_sort Augustine, Robin
collection PubMed
description The rampant spread of COVID-19 and the worldwide prevalence of infected cases demand a rapid, simple, and cost-effective Point of Care Test (PoCT) for the accurate diagnosis of this pandemic. The most common molecular tests approved by regulatory bodies across the world for COVID-19 diagnosis are based on Polymerase Chain Reaction (PCR). While PCR-based tests are highly sensitive, specific, and remarkably reliable, they have many limitations ranging from the requirement of sophisticated laboratories, need of skilled personnel, use of complex protocol, long wait times for results, and an overall high cost per test. These limitations have inspired researchers to search for alternative diagnostic methods that are fast, economical, and executable in low-resource laboratory settings. The discovery of Loop-mediated isothermal Amplification (LAMP) has provided a reliable substitute platform for the accurate detection of low copy number nucleic acids in the diagnosis of several viral diseases, including epidemics like Severe Acute Respiratory Syndrome (SARS) and Middle East Respiratory Syndrome (MERS). At present, a cocktail of LAMP assay reagents along with reverse transcriptase enzyme (Reverse Transcription LAMP, RT-LAMP) can be a robust solution for the rapid and cost-effective diagnosis for COVID-19, particularly in developing, and low-income countries. In summary, the development of RT-LAMP based diagnostic tools in a paper/strip format or the integration of this method into a microfluidic platform such as a Lab-on-a-chip may revolutionize the concept of PoCT for COVID-19 diagnosis. This review discusses the principle, technology and past research underpinning the success for using this method for diagnosing MERS and SARS, in addition to ongoing research, and the prominent prospect of RT-LAMP in the context of COVID-19 diagnosis.
format Online
Article
Text
id pubmed-7464797
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-74647972020-09-04 Loop-Mediated Isothermal Amplification (LAMP): A Rapid, Sensitive, Specific, and Cost-Effective Point-of-Care Test for Coronaviruses in the Context of COVID-19 Pandemic Augustine, Robin Hasan, Anwarul Das, Suvarthi Ahmed, Rashid Mori, Yasuyoshi Notomi, Tsugunori Kevadiya, Bhavesh D. S. Thakor, Avnesh Biology (Basel) Review The rampant spread of COVID-19 and the worldwide prevalence of infected cases demand a rapid, simple, and cost-effective Point of Care Test (PoCT) for the accurate diagnosis of this pandemic. The most common molecular tests approved by regulatory bodies across the world for COVID-19 diagnosis are based on Polymerase Chain Reaction (PCR). While PCR-based tests are highly sensitive, specific, and remarkably reliable, they have many limitations ranging from the requirement of sophisticated laboratories, need of skilled personnel, use of complex protocol, long wait times for results, and an overall high cost per test. These limitations have inspired researchers to search for alternative diagnostic methods that are fast, economical, and executable in low-resource laboratory settings. The discovery of Loop-mediated isothermal Amplification (LAMP) has provided a reliable substitute platform for the accurate detection of low copy number nucleic acids in the diagnosis of several viral diseases, including epidemics like Severe Acute Respiratory Syndrome (SARS) and Middle East Respiratory Syndrome (MERS). At present, a cocktail of LAMP assay reagents along with reverse transcriptase enzyme (Reverse Transcription LAMP, RT-LAMP) can be a robust solution for the rapid and cost-effective diagnosis for COVID-19, particularly in developing, and low-income countries. In summary, the development of RT-LAMP based diagnostic tools in a paper/strip format or the integration of this method into a microfluidic platform such as a Lab-on-a-chip may revolutionize the concept of PoCT for COVID-19 diagnosis. This review discusses the principle, technology and past research underpinning the success for using this method for diagnosing MERS and SARS, in addition to ongoing research, and the prominent prospect of RT-LAMP in the context of COVID-19 diagnosis. MDPI 2020-07-22 /pmc/articles/PMC7464797/ /pubmed/32707972 http://dx.doi.org/10.3390/biology9080182 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Augustine, Robin
Hasan, Anwarul
Das, Suvarthi
Ahmed, Rashid
Mori, Yasuyoshi
Notomi, Tsugunori
Kevadiya, Bhavesh D.
S. Thakor, Avnesh
Loop-Mediated Isothermal Amplification (LAMP): A Rapid, Sensitive, Specific, and Cost-Effective Point-of-Care Test for Coronaviruses in the Context of COVID-19 Pandemic
title Loop-Mediated Isothermal Amplification (LAMP): A Rapid, Sensitive, Specific, and Cost-Effective Point-of-Care Test for Coronaviruses in the Context of COVID-19 Pandemic
title_full Loop-Mediated Isothermal Amplification (LAMP): A Rapid, Sensitive, Specific, and Cost-Effective Point-of-Care Test for Coronaviruses in the Context of COVID-19 Pandemic
title_fullStr Loop-Mediated Isothermal Amplification (LAMP): A Rapid, Sensitive, Specific, and Cost-Effective Point-of-Care Test for Coronaviruses in the Context of COVID-19 Pandemic
title_full_unstemmed Loop-Mediated Isothermal Amplification (LAMP): A Rapid, Sensitive, Specific, and Cost-Effective Point-of-Care Test for Coronaviruses in the Context of COVID-19 Pandemic
title_short Loop-Mediated Isothermal Amplification (LAMP): A Rapid, Sensitive, Specific, and Cost-Effective Point-of-Care Test for Coronaviruses in the Context of COVID-19 Pandemic
title_sort loop-mediated isothermal amplification (lamp): a rapid, sensitive, specific, and cost-effective point-of-care test for coronaviruses in the context of covid-19 pandemic
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7464797/
https://www.ncbi.nlm.nih.gov/pubmed/32707972
http://dx.doi.org/10.3390/biology9080182
work_keys_str_mv AT augustinerobin loopmediatedisothermalamplificationlamparapidsensitivespecificandcosteffectivepointofcaretestforcoronavirusesinthecontextofcovid19pandemic
AT hasananwarul loopmediatedisothermalamplificationlamparapidsensitivespecificandcosteffectivepointofcaretestforcoronavirusesinthecontextofcovid19pandemic
AT dassuvarthi loopmediatedisothermalamplificationlamparapidsensitivespecificandcosteffectivepointofcaretestforcoronavirusesinthecontextofcovid19pandemic
AT ahmedrashid loopmediatedisothermalamplificationlamparapidsensitivespecificandcosteffectivepointofcaretestforcoronavirusesinthecontextofcovid19pandemic
AT moriyasuyoshi loopmediatedisothermalamplificationlamparapidsensitivespecificandcosteffectivepointofcaretestforcoronavirusesinthecontextofcovid19pandemic
AT notomitsugunori loopmediatedisothermalamplificationlamparapidsensitivespecificandcosteffectivepointofcaretestforcoronavirusesinthecontextofcovid19pandemic
AT kevadiyabhaveshd loopmediatedisothermalamplificationlamparapidsensitivespecificandcosteffectivepointofcaretestforcoronavirusesinthecontextofcovid19pandemic
AT sthakoravnesh loopmediatedisothermalamplificationlamparapidsensitivespecificandcosteffectivepointofcaretestforcoronavirusesinthecontextofcovid19pandemic