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Identification of Leaf-Scale Wheat Powdery Mildew (Blumeria graminis f. sp. Tritici) Combining Hyperspectral Imaging and an SVM Classifier

Powdery mildew (PM, Blumeria graminis f. sp. tritici) is a devastating disease for wheat growth and production. It is highly meaningful that the disease severities can be objectively and accurately identified by image visualization technology. In this study, an integral method was proposed based on...

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Autores principales: Zhao, Jinling, Fang, Yan, Chu, Guomin, Yan, Hao, Hu, Lei, Huang, Linsheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7464903/
https://www.ncbi.nlm.nih.gov/pubmed/32722022
http://dx.doi.org/10.3390/plants9080936
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author Zhao, Jinling
Fang, Yan
Chu, Guomin
Yan, Hao
Hu, Lei
Huang, Linsheng
author_facet Zhao, Jinling
Fang, Yan
Chu, Guomin
Yan, Hao
Hu, Lei
Huang, Linsheng
author_sort Zhao, Jinling
collection PubMed
description Powdery mildew (PM, Blumeria graminis f. sp. tritici) is a devastating disease for wheat growth and production. It is highly meaningful that the disease severities can be objectively and accurately identified by image visualization technology. In this study, an integral method was proposed based on a hyperspectral imaging dataset and machine learning algorithms. The disease severities of wheat leaves infected with PM were quantitatively identified based on hyperspectral images and image segmentation techniques. A technical procedure was proposed to perform the identification and evaluation of leaf-scale wheat PM, specifically including three primary steps of the acquisition and preprocessing of hyperspectral images, the selection of characteristic bands, and model construction. Firstly, three-dimensional reduction algorithms, namely principal component analysis (PCA), random forest (RF), and the successive projections algorithm (SPA), were comparatively used to select the bands that were most sensitive to PM. Then, three diagnosis models were constructed by a support vector machine (SVM), RF, and a probabilistic neural network (PNN). Finally, the best model was selected by comparing the overall accuracies. The results show that the SVM model constructed by PCA dimensionality reduction had the best result, and the classification accuracy reached 93.33% by a cross-validation method. There was an obvious improvement of the identification accuracy with the model, which achieved an 88.00% accuracy derived from the original hyperspectral images. This study can provide a reference for accurately estimating the disease severity of leaf-scale wheat PM and other plant diseases by non-contact measurement technology.
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spelling pubmed-74649032020-09-04 Identification of Leaf-Scale Wheat Powdery Mildew (Blumeria graminis f. sp. Tritici) Combining Hyperspectral Imaging and an SVM Classifier Zhao, Jinling Fang, Yan Chu, Guomin Yan, Hao Hu, Lei Huang, Linsheng Plants (Basel) Article Powdery mildew (PM, Blumeria graminis f. sp. tritici) is a devastating disease for wheat growth and production. It is highly meaningful that the disease severities can be objectively and accurately identified by image visualization technology. In this study, an integral method was proposed based on a hyperspectral imaging dataset and machine learning algorithms. The disease severities of wheat leaves infected with PM were quantitatively identified based on hyperspectral images and image segmentation techniques. A technical procedure was proposed to perform the identification and evaluation of leaf-scale wheat PM, specifically including three primary steps of the acquisition and preprocessing of hyperspectral images, the selection of characteristic bands, and model construction. Firstly, three-dimensional reduction algorithms, namely principal component analysis (PCA), random forest (RF), and the successive projections algorithm (SPA), were comparatively used to select the bands that were most sensitive to PM. Then, three diagnosis models were constructed by a support vector machine (SVM), RF, and a probabilistic neural network (PNN). Finally, the best model was selected by comparing the overall accuracies. The results show that the SVM model constructed by PCA dimensionality reduction had the best result, and the classification accuracy reached 93.33% by a cross-validation method. There was an obvious improvement of the identification accuracy with the model, which achieved an 88.00% accuracy derived from the original hyperspectral images. This study can provide a reference for accurately estimating the disease severity of leaf-scale wheat PM and other plant diseases by non-contact measurement technology. MDPI 2020-07-24 /pmc/articles/PMC7464903/ /pubmed/32722022 http://dx.doi.org/10.3390/plants9080936 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhao, Jinling
Fang, Yan
Chu, Guomin
Yan, Hao
Hu, Lei
Huang, Linsheng
Identification of Leaf-Scale Wheat Powdery Mildew (Blumeria graminis f. sp. Tritici) Combining Hyperspectral Imaging and an SVM Classifier
title Identification of Leaf-Scale Wheat Powdery Mildew (Blumeria graminis f. sp. Tritici) Combining Hyperspectral Imaging and an SVM Classifier
title_full Identification of Leaf-Scale Wheat Powdery Mildew (Blumeria graminis f. sp. Tritici) Combining Hyperspectral Imaging and an SVM Classifier
title_fullStr Identification of Leaf-Scale Wheat Powdery Mildew (Blumeria graminis f. sp. Tritici) Combining Hyperspectral Imaging and an SVM Classifier
title_full_unstemmed Identification of Leaf-Scale Wheat Powdery Mildew (Blumeria graminis f. sp. Tritici) Combining Hyperspectral Imaging and an SVM Classifier
title_short Identification of Leaf-Scale Wheat Powdery Mildew (Blumeria graminis f. sp. Tritici) Combining Hyperspectral Imaging and an SVM Classifier
title_sort identification of leaf-scale wheat powdery mildew (blumeria graminis f. sp. tritici) combining hyperspectral imaging and an svm classifier
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7464903/
https://www.ncbi.nlm.nih.gov/pubmed/32722022
http://dx.doi.org/10.3390/plants9080936
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